Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5225g00001 ATGAGTTGCAACGGCTGCCGAGTTCTTCGAAAGGGATGCAGTGAGAACTGTATATTGCGGCCTTGCTTGCAGTGGATCGATAGCCCTCAAGCCCAAGGCTACGCCACTGTGTTCGTCGCTAAATTCTTTGGCCGTGCTGGCCTCATGTCGTTTATTTCTAACGTCCCTCCCAACCAGAGACCTGCTCTGTTTCAGTCCTTGTTGTTCGAAGCGTGTGGGCGAACGGTGAACCCTGTGAACGGAGCTGTCGGGCTTCTGTGGACGGGAAACTGGCATGTGTGCGAGGCGGCCGTGGAGACGGTGCTGCGCGGCGGCACGTTAAAGCCCATGCCGGAGCTTCCAGGGTTGGATGCACCGGCTCGTGCTCCGGCTACGGACGAGGCATCCGAAGCGGAGGTTACGTGCAATGACATGGGGAGGATCCGAGATCCGACCTCGAATTCGGGATATAATAACAAGGTCTCTCCCGGTGGCAAACTAGGACTGTCCGGTGACTCTGTCATGCTCCAGACGACCGATCTCGACTTGCGATTGACGCCAAGCTTCCTCCATAGAGTGCCTGCCTACGGCTGCGGACCACAAGTCCGACGGCCGGGTTCGCCGTCGATGAACTCGGAAGAATCCGTCACGACGGCGACTTGTTTGGAAAGCGCGATCGGAGATCACCGCCCTCCCGGCCGAGACACGAAGCTTCTCAATCTTTTCATCTGA 711 0.5767 MSCNGCRVLRKGCSENCILRPCLQWIDSPQAQGYATVFVAKFFGRAGLMSFISNVPPNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCEAAVETVLRGGTLKPMPELPGLDAPARAPATDEASEAEVTCNDMGRIRDPTSNSGYNNKVSPGGKLGLSGDSVMLQTTDLDLRLTPSFLHRVPAYGCGPQVRRPGSPSMNSEESVTTATCLESAIGDHRPPGRDTKLLNLFI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5225g00001 236 MobiDBLite consensus disorder prediction 140 154 - -
Pral5225g00001 236 MobiDBLite consensus disorder prediction 119 157 - -
Pral5225g00001 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 218 - -
Pral5225g00001 236 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Pral5225g00001 236 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5225g00001 Pral-Chr5225 13471 14896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5225g00001 1 236 AS2 family AT4G37540 56.349 3.35e-81 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5225g00001 LOB 7.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5225g00001 - - gmx:100802764 346.28