Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5224g00004 ATGTTCGCTGGAGATATTTCCCGGCAATGTCCGTCACACATGATTTTGTTTACTCTTTTTGTTCTCTGCCTGGCTGGTTCGTCCCTGTCGGTTGAGCTTCAGATGCTCATTAAGTTCAAGTCCTCTGTTCGAACTTCAAATGCCGATGATGTTTTTGGTTCCTGGACCGAAGGCAATTCTGTCTGCAACTTCACTGGGATTATCTGCAATTCCAATGGACTCGTTTCAGAAATCAATCTCGCCGGAAAAAGTCTCGGAGGTACTATTCGGTTTGATTCACTTTGCGGGCTTCAGTCGTTACAGAAATTATCTCTGGGGTCGAATTCCTTTCACGGAAGCATCAGTGAGGACCTGAGGAAGTGCAGTAATTTGAAGTATTTGGATTTGGGCGGGAATTCTTTTTCTGGGGTAATGCCCGAGTTCTCTAATTTGATCAAGCTTACCTACTTGAACTTGAATGCTAGTGGAATTTCTGGGGTATTTCCATGGAAATCATTGGAAAATCTAACTAGTCTTGGATTCTTAAGCCTTGGCGATAATAAATTTGAAAAAAGTCCTTTTCCTGTGGAGGTATTGAAGCTTGAGAAATTGTATTGGCTTTACCTCACAAACTGCAGCATCACTGGGAAAATCCCAATGGGTATTGGGAATCTGACTCAGCTTGAGAATCTTGAGCTTTCTGATAACCTTTTGACAGGTGAAATCCCAAGTGATATTGGAAAGCTTCAGAAACTGAGACAAATTGAGCTATATGACAACTACTTGACTGGGAAAATCCCAATAGGATTTCGTGATCTTACAAGTCTTGTGTACTTGGATGTTTCTAATAATCAGCTTGAAGGTGATATTTCTGAGCTACGGTTCTTGACGAACTTAGCTTCTCTTCAGCTTTTTCAGAACCGATTCTCTGGAGGAATTCCAACCGAGTTTGGAGATTTCAAAAGCCTCATTGAATTTTCTCTTTATGCAAATAATTTTACTGGTCCTCTCCCTCAAAAGCTTGGATCCCGGGCTGGCTTACAATATATTGATGTTTCTGATAACTCTCTTTCTGGTCCTATCCCCCCTGACATGTGTAGGAACAACAACATGACCGAGCTAGCTATGTTAAACAATAGCTTCACTGGAAGTATACCAGAAACATATGTGAATTGTTCGGCTATGGTTCGCTTTCTTGTTAACAGAAACTCGCTTTCTGGTCGTATTCCTTCGGGTTTATGGGGCCTGCCAAATATGGAAATAATTGATCTTTCAATGAACCAGTTTGACGGTCCAGTGACATCTGATATTGCTGAAGCAAAATCTCTTGCACAGCTATTTTTATCTGACAATAAGTTCTCAGGTCAGCTACCCTCGGGAATTTCAGAAGCTTCTTCATTGGTATCAATTAAGCTGAGTTCAAATCAATTCTCTGGTAAAATACCTGATACTATAGGAAACTTGGAGAAATTGGGTAGTCTTAAGTTGGACGGAAACAATTTTTCTGGCTCTATACCGGAATCTTTAAGTTCTTGTATTTCTCTTAGTGAAATAAACATTGCTGGTAACTCGCTTTCTGGGGAAATCCCTACGAGTCTTGGCTCTCTGCCTACCCTCAATTCATTAAACTTGTCATCCAATAGACTTTCTGGAGAAATTCCGTCGAGCTTGTCATCTCTTAAACTGAGCCTTCTTGATTTATCAAACAACAATTTTTTTGGTCCAGTACCAGATTCACTCTCTATTCCAGCATTCATAGATGGGTTAAAGGGGAATCCTGGCTTATGCAGTGAGACTTTGGAAAATTTTAGGCCATGTTCATTGGGTAGCACTGGCTCTAGTCGAATTAGGAACATTATACTCTGTTTGGTTGCTGGTATAATGGTTCTGCTAGTTTCATTGGCATGTATATTCTTCCTGAAACTCAAGCAGAACAAGTTTGAGGAGAAGCCTTTGAAGACTAATTCCTGGGATTTAAAGCAGTACCATGTGATAAACTTCAATGAAAATGAAGTCATTGAAGGGATCAAGGCTGAAAATGTGATTGGCAAGGGAGGATCTGGGAATGTTTACAAGGTTGTTCTGAAATGTGGCAAAGAATTGGCAGTCAAACACATATGGACTTCTAATCCAGGCGAACCAGGAAGTGGCCGAAGCAGCTCAGCGATGCTGAAAAGAAGTTGCCGTACCCCAGAGTATGATGCAGAGGTGGCTGCTCTAAGCTCCATAAGGCATGTGAATGTGGTGAAGCTCTACTGTAGCATCACTAGTGAAGATAGTAGCCTTCTTGTTTATGAGTTCTTACCGAATGGGAGTTTGTGGGATAAACTGCACAATTGCCAGAAAACTCCTATGGCTTGGGATGTTAGGTATGAAATTGCATTGGGAGCAGCTAGAGGATTGGAGTATCTGCATCATGGGTGTGATAGGCCAGTTATACATAGAGATGTGAAATCAAGTAACATCTTGATTGATAAAGAATGGAAGCCAAGGATTGCTGACTTCGGGCTTGCCAAGATTGTGCAAAGAGGAGCAGGCAATTGGACAAATGTTGTTGCTGGAACACTTGGATACATGGCTCCTGAGTATGCCTATTCATGTAAGGTGACTGAGAAGAGTGATGTGTACAGTTTTGGAGTAGTTCTAATGGAGCTGGTGACTGGGAAGAAGCCGAATGAATCGGAGTTTGGAGAAAACAAGGACATAGTCCACTGGGTATGCGGCAACAAGAGGACTATAGAAGACATGGCTGAACTAGTGGATTCCACAATTCCAAAGCATTTCAAAGATGATGCCATGAAGGTTCTGAGAATTGCAACACTCTGCACTGTGAAGGTTCCATACTCAAGACCTTCCATGAGAATGGTGGTTCAGATGCTGGAAGAGGCAGCACCATCTACTCTGACTGATGTTGTTGTGACTAAAGATGGCTAA 2913 0.4174 MFAGDISRQCPSHMILFTLFVLCLAGSSLSVELQMLIKFKSSVRTSNADDVFGSWTEGNSVCNFTGIICNSNGLVSEINLAGKSLGGTIRFDSLCGLQSLQKLSLGSNSFHGSISEDLRKCSNLKYLDLGGNSFSGVMPEFSNLIKLTYLNLNASGISGVFPWKSLENLTSLGFLSLGDNKFEKSPFPVEVLKLEKLYWLYLTNCSITGKIPMGIGNLTQLENLELSDNLLTGEIPSDIGKLQKLRQIELYDNYLTGKIPIGFRDLTSLVYLDVSNNQLEGDISELRFLTNLASLQLFQNRFSGGIPTEFGDFKSLIEFSLYANNFTGPLPQKLGSRAGLQYIDVSDNSLSGPIPPDMCRNNNMTELAMLNNSFTGSIPETYVNCSAMVRFLVNRNSLSGRIPSGLWGLPNMEIIDLSMNQFDGPVTSDIAEAKSLAQLFLSDNKFSGQLPSGISEASSLVSIKLSSNQFSGKIPDTIGNLEKLGSLKLDGNNFSGSIPESLSSCISLSEINIAGNSLSGEIPTSLGSLPTLNSLNLSSNRLSGEIPSSLSSLKLSLLDLSNNNFFGPVPDSLSIPAFIDGLKGNPGLCSETLENFRPCSLGSTGSSRIRNIILCLVAGIMVLLVSLACIFFLKLKQNKFEEKPLKTNSWDLKQYHVINFNENEVIEGIKAENVIGKGGSGNVYKVVLKCGKELAVKHIWTSNPGEPGSGRSSSAMLKRSCRTPEYDAEVAALSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDKLHNCQKTPMAWDVRYEIALGAARGLEYLHHGCDRPVIHRDVKSSNILIDKEWKPRIADFGLAKIVQRGAGNWTNVVAGTLGYMAPEYAYSCKVTEKSDVYSFGVVLMELVTGKKPNESEFGENKDIVHWVCGNKRTIEDMAELVDSTIPKHFKDDAMKVLRIATLCTVKVPYSRPSMRMVVQMLEEAAPSTLTDVVVTKDG 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5224g00004 970 Gene3D Transferase(Phosphotransferase) domain 1 761 966 - -
Pral5224g00004 970 ProSiteProfiles Leucine-rich repeat profile. 268 290 IPR001611 GO:0005515
Pral5224g00004 970 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Pral5224g00004 970 FunFam Leucine-rich repeat receptor-like protein kinase TDR 286 601 - -
Pral5224g00004 970 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Pral5224g00004 970 Pfam Leucine rich repeat 220 279 IPR001611 GO:0005515
Pral5224g00004 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 364 956 - -
Pral5224g00004 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Pral5224g00004 970 FunFam Receptor-like protein kinase HAIKU2 652 760 - -
Pral5224g00004 970 SMART serkin_6 669 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5224g00004 970 SUPERFAMILY RNI-like 324 650 - -
Pral5224g00004 970 Gene3D Phosphorylase Kinase; domain 1 653 760 - -
Pral5224g00004 970 SMART LRR_typ_2 122 143 IPR003591 -
Pral5224g00004 970 SMART LRR_typ_2 529 553 IPR003591 -
Pral5224g00004 970 SMART LRR_typ_2 218 242 IPR003591 -
Pral5224g00004 970 SMART LRR_typ_2 481 505 IPR003591 -
Pral5224g00004 970 SMART LRR_typ_2 97 121 IPR003591 -
Pral5224g00004 970 SMART LRR_typ_2 169 194 IPR003591 -
Pral5224g00004 970 SMART LRR_typ_2 266 296 IPR003591 -
Pral5224g00004 970 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Pral5224g00004 970 Gene3D Ribonuclease Inhibitor 188 285 IPR032675 -
Pral5224g00004 970 Gene3D Ribonuclease Inhibitor 475 598 IPR032675 -
Pral5224g00004 970 Gene3D Ribonuclease Inhibitor 383 474 IPR032675 -
Pral5224g00004 970 FunFam Serine/threonine-protein kinase-like protein CCR4 761 968 - -
Pral5224g00004 970 FunFam Probable inactive receptor kinase RLK902 29 188 - -
Pral5224g00004 970 Gene3D Ribonuclease Inhibitor 286 382 IPR032675 -
Pral5224g00004 970 FunFam Leucine-rich receptor-like protein kinase family protein 189 285 - -
Pral5224g00004 970 SUPERFAMILY L domain-like 62 358 - -
Pral5224g00004 970 ProSiteProfiles Protein kinase domain profile. 669 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5224g00004 970 Pfam Protein kinase domain 672 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5224g00004 970 SUPERFAMILY Protein kinase-like (PK-like) 662 954 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5224g00004 Pral-Chr5224 25034 28833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5224g00004 18 969 Receptor kinase-like Gene Family AT1G09970 57.380 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5224g00004 Pkinase 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5224g00004 - - gmx:100811489 1349.73