Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5222g00006 ATGGCCGGAGCTCATTTAGCATTGCTTCAATTTCTCTGTGTACTTATCACTCAATTATCACATGGAGCCAGCAGCCGACCAGAATTTCGGGATTATTATTGCAGCAACAGCAGCAACACATCAAAGAGCACCTACCGGAACAACCTCAATACCCTTTTATCAAATCTCGCTTCCGACAAACAAATAGATTATGGCTTCTACAATCTCTCTTATGGTAGTTACCCAAATACAATATATGCTGTTGGGTTATGCAGGGGAGATGTTATGCCAGACTTTTGCCCCAGCTGCCTCAAAAATTCATCAGTCCTGCTGCCACAACTATGTCCAAATCAGAAGCAAGCTTTTGGGATGTACGATGAGTGCATGTTATCTTACTCAAACACTTCCATATTAGGCAATCGGGTGGATCCTATTGTTACAATTCCACGTTGCTATAATCACAGGCCGGGTGGTAGGGTTATTAGACCCATTTGTAACTTTAGATATGAAAGTAGCCGCTTCTATGCAATTACAGCTGATGTACCCTTATCGGCTCCGTCGCCGCTACCGTCTCCCCCTCCCCCTCCTCTGCTTACACCTCCATCACTTCCATCGACCAACACAACATCTTCATCACCTCCTCCATATGCAGATACAATATCCTCAGAAGGAAAGAAATCACAAACTATCATTGCCATTATTGTGTCAATTTCTGCATTTGTTGTGCTGCTTATCTGTGTTTGGATTTGTGTAAGAGTGAGAAACCAAGGAAGAAAATTACCAAGTGAGATTGACGCTGATGATTCAATTGACGTCACTGAGTCAATACAGTTCGAATTTGACACCATCAAAGTTGCTACAAATAACTTCTCCGGTCAAAACAAGCTTGGACAAGGAGGATTTGGACCAGTTTACAAGAGCAAGCTCTCCAGCGGAAAAGAGGTTGCCGTGAAAAGGTTGTCTATGGATTCTGGGCAAGGGGACATTGAATTTAAGAATGAAGTACAAGTAATGGTCAAGCTTCAACACCGAAATTTGGTTAGACTCCTCGGTTTTTGTTTGAAAGAAAAGGAACGCCTTCTAGTATATGAGCTTCTTCCTAATAGAAGTCTTGATTACTTTAGACATTCTATTTCTACATGA 1122 0.4198 MAGAHLALLQFLCVLITQLSHGASSRPEFRDYYCSNSSNTSKSTYRNNLNTLLSNLASDKQIDYGFYNLSYGSYPNTIYAVGLCRGDVMPDFCPSCLKNSSVLLPQLCPNQKQAFGMYDECMLSYSNTSILGNRVDPIVTIPRCYNHRPGGRVIRPICNFRYESSRFYAITADVPLSAPSPLPSPPPPPLLTPPSLPSTNTTSSSPPPYADTISSEGKKSQTIIAIIVSISAFVVLLICVWICVRVRNQGRKLPSEIDADDSIDVTESIQFEFDTIKVATNNFSGQNKLGQGGFGPVYKSKLSSGKEVAVKRLSMDSGQGDIEFKNEVQVMVKLQHRNLVRLLGFCLKEKERLLVYELLPNRSLDYFRHSIST 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5222g00006 373 SUPERFAMILY Protein kinase-like (PK-like) 263 372 IPR011009 -
Pral5222g00006 373 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Pral5222g00006 373 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Pral5222g00006 373 MobiDBLite consensus disorder prediction 196 214 - -
Pral5222g00006 373 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 367 - -
Pral5222g00006 373 FunFam Cysteine-rich receptor-like protein kinase 10 246 358 - -
Pral5222g00006 373 Gene3D - 27 129 IPR038408 -
Pral5222g00006 373 Gene3D Phosphorylase Kinase; domain 1 247 358 - -
Pral5222g00006 373 MobiDBLite consensus disorder prediction 180 195 - -
Pral5222g00006 373 Pfam Protein tyrosine and serine/threonine kinase 286 367 IPR001245 GO:0004672|GO:0006468
Pral5222g00006 373 ProSiteProfiles Protein kinase domain profile. 283 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5222g00006 373 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 130 - -
Pral5222g00006 373 MobiDBLite consensus disorder prediction 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5222g00006 Pral-Chr5222 49956 52161 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5222g00006 141 367 Receptor kinase-like Gene Family AT4G05200 46.983 2.07e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5222g00006 Stress-antifung 7.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5222g00006 - - pcin:129293337 234.572