Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5222g00004 ATGCAGGGTTGGCTTCCCAATGGCCAAGAAGTTGCTGTGAAAATGTTGTCCAGGCATTCTAGGCAAGGAGATTTAGAATTTAAGACCGAAGTGATGTTAGTAGCAAAACTTCACCATCGAAATTTAGTAAGATTACTTGGTTTCTGTTTAGAAAAAACAGAAAGACTACTCGTCTATGAATTTCTTGCCAATAAAAGTCTTGATTTCTTTTTATTCGATCCAAATCAGCAAGCTTTTTTGAATTGGATAGTACGATACAAGATTATAAGGGGCATTGCTCGTGGTCTGCTTTATCTTCATCAAGATTCAAGGTTACGTATTATTCATCGTGATCTTAAAGCAAGCAATATTCTCTTGGATGATGAATTAAATCCTAAGATATCAGATTTTGGCACTGCGAGACTATTTAAGGCAGATCAAACTCGAAGCAATACTAATAGAATTGTGGGAACTCGCGGTTATATGGCCCCAGAATATGTACTGTACGGTCAATGTTCAGTAAAATCAGACGTATATAGTTTTGGGGTATTGGTTCTAGAGATTATAAGTGGCAAGATAAACAACTGCACCTTTCATGTAGAGAATACACAGCATCAGCTGGACCTATTAAGTTTTGTATGGAAAAATTGGAAGGAAGGGACGACCTCAAATATAGTAGATCCTGTGATAAGCAATGGTTCAAGAAATGAAATAATGAGATGCATTCACATTGCATTGCTCTGTGTTCAAGAAAATGCAGCTGATCGACCAACCATGGCCTCAGTCTCATTTATGCTAAACAGCTTCTCTTCCTCTCTCCCTGTACCTTCAGAACGTCGATTTCTTGTGAATTATAGCAGTTCATCTGAGACAATGACTTTGAGGCATAACTGTTCAGAGGCAACAAGAGCAAGTGAACAAGGAAGAAACTCTAATCAATCATCACGAAATGATCTATCAATTACGGAGCTATATCCTCGCTAG 963 0.3801 MQGWLPNGQEVAVKMLSRHSRQGDLEFKTEVMLVAKLHHRNLVRLLGFCLEKTERLLVYEFLANKSLDFFLFDPNQQAFLNWIVRYKIIRGIARGLLYLHQDSRLRIIHRDLKASNILLDDELNPKISDFGTARLFKADQTRSNTNRIVGTRGYMAPEYVLYGQCSVKSDVYSFGVLVLEIISGKINNCTFHVENTQHQLDLLSFVWKNWKEGTTSNIVDPVISNGSRNEIMRCIHIALLCVQENAADRPTMASVSFMLNSFSSSLPVPSERRFLVNYSSSSETMTLRHNCSEATRASEQGRNSNQSSRNDLSITELYPR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5222g00004 320 MobiDBLite consensus disorder prediction 293 314 - -
Pral5222g00004 320 SMART serkin_6 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5222g00004 320 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5222g00004 320 FunFam Cysteine-rich receptor-like protein kinase 28 62 267 - -
Pral5222g00004 320 SUPERFAMILY Protein kinase-like (PK-like) 5 286 IPR011009 -
Pral5222g00004 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
Pral5222g00004 320 Gene3D Transferase(Phosphotransferase) domain 1 62 272 - -
Pral5222g00004 320 MobiDBLite consensus disorder prediction 293 320 - -
Pral5222g00004 320 PIRSF ILK 3 274 - -
Pral5222g00004 320 Gene3D Phosphorylase Kinase; domain 1 1 61 - -
Pral5222g00004 320 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 319 - -
Pral5222g00004 320 Pfam Protein kinase domain 7 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5222g00004 Pral-Chr5222 21040 22614 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5222g00004 2 320 Receptor kinase-like Gene Family AT4G21410 57.321 1.20e-125 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5222g00004 Pkinase 7.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5222g00004 - - gmx:100796158 422.165