Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5221g00012 ATGTCTACCAGTTCTCTGGTTTTGCTCTCATTGCTTTCTCATCTTACCATTCTGTGTGCCCAGCTTCCTGTTCCTGACTGGGCATGTACCTATTGTTTCCATGACAGAGGTAACTTTACAAATACAAGTACGTACCAGAGCAACTTTAATATTGTCCTTTCAAATCTCACTTCCAACACAGAAATTGACTATGGCTTCTACAATTTGTCTCATGGCCAGCATCCTGATAGAGTAAGCACAATTGGGCTATGTCGAGGAGATATCACACCAGATGAATGCCATGCTTGCCTCAAGAATGCCTCACTTATTCTCCCTATGTCGTGTCCAAATATGAGGGAGGCTATGGCAGGCTCCGACGAGTGCTTTCTCCGACAATCAAACTGCTCAATATTTAGGGTCATGGAATCTAACGCTTCGTGCATATGGTGGAACAGGTATGATACAGCAGAGCAGGACAAGTACAATGAAGTTAGTGGATTATTGGAAGGACTGAGAAGCAAAGCGAAGAATGGAGATTCACTTCTTAAGTATGCAGAAGCATATCAAACGGCTCCAAACTTGCAAAACATATTTGGTGCGGTTCAGTGCACTCCTGATTTGTCTCAGCAAGATTGCTCCGACTGCTTGAAGACCGCTATCTCTGAACTTCCCAATTGTTGTTTCGCAAAGAGAGGTGGTAGGGTTATCAAACCCAGCTGCAATGTTAGGTATGAGAACTACCGTTTCTTTGGTCCCATGGCTGAGGATTCACCACCGCTGCTGCCGTCTCCTCTTTCCCCTCCAACGACGTCCACCTCAAAAGGGCATAGTAGACAGTCAATCATTACTAGCATTGCCATTGTTTTGCCCACTGCTGCAATCATCCTAGTGCTCATCTGTGTCTTCAGCATTTGTTGGAGAATGAGGAAAGGCAGAGAAGCAGTTCAAACGGAAGCAGAACTTGATGGTCAAATTGAATTTCTTGAGTCATTACAATTAGATTTTGAAACCATCAGAACTGCAACAGATAAATTTTCTGATGCAAATAAACTAGGACAAGGTGGATTTGGACCAGTTTATAAGGGTAAGCTCCATAATGGAGAAGTTGCTGTCAAAAGGTTATCCAACAATTCTGGACAAGGAGCTATAGAATTTAAGAATGAAGTAAAGTTGGTGGCTAAGCTTCAGCATCGCAATTTGGCCAGACTCATTGGTTTCTGTTTAGAAAGAGGAGAAAGACTTCTCATCTATGAGTTTCTTCCCAATAAAAGTCTTGAATACCTGTTATTTGGCAAGTTACAAGTGCTTTCATATCAAGAAAAAACTTACATGTTCTTTAACTTAATTAATTTATATATTATCTCTCTCTATTTTAAGTTAACTGTAATGATCGATAAAAGATTACATCCATTAATATTAAATTGGTTCTTTTGGTTTCAGCTTCCTGAGTTGAGATCTATCTACTGTTTCCATAGCAGAGGTAACTTTACAAATTCGAGTACGTACCAAACCACCCTTAACATCGTCCTTTCAGATCTCACTTCCAACACAGCAATTGACTATGGCTTCTACAATTTGTCTCATGGCCAGTATCCTTATAGAGTAAGCGCAATTGGGTTATGTCGAGGGGATATTAAACCAAATGAATGCCGTTCTTGTCTCAAGAATGCCTCAGTTCTTGTCCCTATGTTGTGTCCGAATATGAAGGAGGCTATGGGAGGCTACGACGAATGCTTTCTCCGATACTCAAACCGCTCAATACTTGGGGTCATGGAATCTGACGCTTCGTTCATATTGTGGAACAAGTATGATACAACAGATCAGGACAAGTACAATGAAGTGGTTAGTGAGTTGTTGGACGGACTGAGAAGCAAAGCTAAGAATGGAGATTCACTTCGTAAATATGCAGAAGCAAATCAAACGGGTCCAAACTTTTACACCATATACGGTGCAGTTCAGTGCACTCCTGATTTGTCTCAGCAAGATTGCTCCGACTGCTTGAAGACGGCTATCTCTGAACTTCCCGATTGTTGTTTCACAAAGAGAGGTGGCAGGGTTATCAAACCCAGCTGCAACGTCAGGTATGAGAACTACCGTTTCTTTGGTCCTGTGGCTGAGCATTCACAGCCGCCGCCGCCGCCGCCTCCTCTTTCCCCTCCGAGGACACCCACCTCAAAAGGGCATAGCAGAAAATCAATCAAGACTATCATTGCCATAGTTTTGCCAACTGCTGCAACCATCTTACTGCTCATCTCTGTCTTCAGTATTATTTGTTTGAGAATGAGGAAAACCAGAGACGCAATTCAGAAGGGAGCAGAACTTGATGATGAAACTGAATTTATTGAGTCATTACAGTTAGATTTTGAAACCATCAGAAGTGCAACAGATAACTTCTCTGATGCAAATAAACTTGGACAAGGTGGATTTGGACCAGTTTATAAGGGTAAGCTCCATAATGGAGAAGAAGTTGCTGTCAAAAGGTTATCAAAGAATTCTGGGCAAGGAGACATAGAATTTAAGAATGAAGTAAAGTTGATGGCTAAGCTTCAGCATCGCAATTTAGCTAGACTCCGTGGCTTCTGTTTGGAAAGAGAAGAAAGACTTCTCATCTATGAGTTCCTTCCGAATAAAAGTCTTGACTACTTATTATTTGATCCAAATCATCGTGCTCAACTGAATTGGGAGATGCGTCACAAAATTATCATGGGCGTAGCTCGTGGCCTTCATTATCTCCATCAAGATTCCCAACTACGAATTATTCATCGTGATCTCAAAGCAAGTAATATTCTTTTAGATGCAGAGTTGAATCCCAAGATATCTGATTTTGGCATGGCAAGATTATTTGCTATGGATCAATCTCAAAGTAACACTAGTAGAATTGTTGGAACTTATGGATATATGGCTCCAGAGTATGCAATGCGTGGGCAATTCTCAATCAAATCAGATGTCTTTAGTTTCGGTGTGCTAATCCTAGAGATTATATGTGGGAAGAAAAACAACAGCATCTTTCATGAAGAGAATATACTGAATCTACTGAGCTTTGTATGGAAAAACTGGAGAGAAGGGACAACCTCAAATATAGTAGATCCTGTATTAAACAATGCGTCAAGCAATGAAATAAAGAGATGCATCCATATTGGGTTGCTATGCGTTCAGGAAAATGTAGCTGATAGGCCAACCATGGCTTCAGTTGCTCTAATGCTTGATAGCCACTCTATAACTCTCTCAGTACCATCCGAACCTCCATTTTTAATGTATAACAGAAGCTTACCAGAAACGAATTCTGGGGAGAATAATTCATCAGGCGCCACAAGATCAGCTGAAGGAGGAAGAGACTATGTTGAAGCCTCAACAAATGAAGTCACAATAACTGAGCTTCATCCTCGCTAA 3369 0.4117 MSTSSLVLLSLLSHLTILCAQLPVPDWACTYCFHDRGNFTNTSTYQSNFNIVLSNLTSNTEIDYGFYNLSHGQHPDRVSTIGLCRGDITPDECHACLKNASLILPMSCPNMREAMAGSDECFLRQSNCSIFRVMESNASCIWWNRYDTAEQDKYNEVSGLLEGLRSKAKNGDSLLKYAEAYQTAPNLQNIFGAVQCTPDLSQQDCSDCLKTAISELPNCCFAKRGGRVIKPSCNVRYENYRFFGPMAEDSPPLLPSPLSPPTTSTSKGHSRQSIITSIAIVLPTAAIILVLICVFSICWRMRKGREAVQTEAELDGQIEFLESLQLDFETIRTATDKFSDANKLGQGGFGPVYKGKLHNGEVAVKRLSNNSGQGAIEFKNEVKLVAKLQHRNLARLIGFCLERGERLLIYEFLPNKSLEYLLFGKLQVLSYQEKTYMFFNLINLYIISLYFKLTVMIDKRLHPLILNWFFWFQLPELRSIYCFHSRGNFTNSSTYQTTLNIVLSDLTSNTAIDYGFYNLSHGQYPYRVSAIGLCRGDIKPNECRSCLKNASVLVPMLCPNMKEAMGGYDECFLRYSNRSILGVMESDASFILWNKYDTTDQDKYNEVVSELLDGLRSKAKNGDSLRKYAEANQTGPNFYTIYGAVQCTPDLSQQDCSDCLKTAISELPDCCFTKRGGRVIKPSCNVRYENYRFFGPVAEHSQPPPPPPPLSPPRTPTSKGHSRKSIKTIIAIVLPTAATILLLISVFSIICLRMRKTRDAIQKGAELDDETEFIESLQLDFETIRSATDNFSDANKLGQGGFGPVYKGKLHNGEEVAVKRLSKNSGQGDIEFKNEVKLMAKLQHRNLARLRGFCLEREERLLIYEFLPNKSLDYLLFDPNHRAQLNWEMRHKIIMGVARGLHYLHQDSQLRIIHRDLKASNILLDAELNPKISDFGMARLFAMDQSQSNTSRIVGTYGYMAPEYAMRGQFSIKSDVFSFGVLILEIICGKKNNSIFHEENILNLLSFVWKNWREGTTSNIVDPVLNNASSNEIKRCIHIGLLCVQENVADRPTMASVALMLDSHSITLSVPSEPPFLMYNRSLPETNSGENNSSGATRSAEGGRDYVEASTNEVTITELHPR 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5221g00012 1122 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Pral5221g00012 1122 MobiDBLite consensus disorder prediction 1081 1122 - -
Pral5221g00012 1122 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 130 - -
Pral5221g00012 1122 SUPERFAMILY Protein kinase-like (PK-like) 776 1086 IPR011009 -
Pral5221g00012 1122 FunFam Cysteine-rich receptor-like protein kinase 10 754 866 - -
Pral5221g00012 1122 Pfam Protein tyrosine and serine/threonine kinase 342 438 IPR001245 GO:0004672|GO:0006468
Pral5221g00012 1122 Pfam Protein tyrosine and serine/threonine kinase 795 1057 IPR001245 GO:0004672|GO:0006468
Pral5221g00012 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 912 924 IPR008271 GO:0004672|GO:0006468
Pral5221g00012 1122 FunFam Cysteine-rich receptor-like protein kinase 10 588 693 - -
Pral5221g00012 1122 Gene3D Phosphorylase Kinase; domain 1 754 866 - -
Pral5221g00012 1122 MobiDBLite consensus disorder prediction 699 715 - -
Pral5221g00012 1122 ProSiteProfiles Gnk2-homologous domain profile. 135 242 IPR002902 -
Pral5221g00012 1122 ProSiteProfiles Gnk2-homologous domain profile. 586 693 IPR002902 -
Pral5221g00012 1122 FunFam Cysteine-rich receptor-like protein kinase 10 138 242 - -
Pral5221g00012 1122 ProSiteProfiles Gnk2-homologous domain profile. 477 580 IPR002902 -
Pral5221g00012 1122 SUPERFAMILY Protein kinase-like (PK-like) 322 440 IPR011009 -
Pral5221g00012 1122 FunFam cysteine-rich receptor-like protein kinase 10 867 1068 - -
Pral5221g00012 1122 ProSiteProfiles Protein kinase domain profile. 791 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5221g00012 1122 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 478 1121 - -
Pral5221g00012 1122 FunFam Cysteine-rich receptor-like protein kinase 10 301 412 - -
Pral5221g00012 1122 Pfam Salt stress response/antifungal 32 127 IPR002902 -
Pral5221g00012 1122 Pfam Salt stress response/antifungal 596 691 IPR002902 -
Pral5221g00012 1122 Pfam Salt stress response/antifungal 482 577 IPR002902 -
Pral5221g00012 1122 Pfam Salt stress response/antifungal 154 240 IPR002902 -
Pral5221g00012 1122 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 475 580 - -
Pral5221g00012 1122 MobiDBLite consensus disorder prediction 1081 1099 - -
Pral5221g00012 1122 Gene3D - 27 129 IPR038408 -
Pral5221g00012 1122 Gene3D - 477 579 IPR038408 -
Pral5221g00012 1122 Gene3D - 137 242 IPR038408 -
Pral5221g00012 1122 Gene3D - 586 693 IPR038408 -
Pral5221g00012 1122 MobiDBLite consensus disorder prediction 697 722 - -
Pral5221g00012 1122 Gene3D Phosphorylase Kinase; domain 1 315 412 - -
Pral5221g00012 1122 Gene3D Transferase(Phosphotransferase) domain 1 867 1069 - -
Pral5221g00012 1122 ProSiteProfiles Protein kinase domain profile. 338 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5221g00012 1122 CDD STKc_IRAK 797 1062 - -
Pral5221g00012 1122 SMART serkin_6 791 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5221g00012 Pral-Chr5221 169555 181469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5221g00012 25 468 Receptor kinase-like Gene Family AT4G21410 40.546 2.38e-87 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5221g00012 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5221g00012 - - hbr:110646116 966.066