Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5221g00010 ATGGTTATGCTGCTTATCTTTGCTTGGATCTGTGTAAGAGTGAGAAAGCAAGGAAGGAAATCTCCAAATGATTCAACCGAACTTACTGAGGAGTCAATACAATTTGAATTTGACACCATCAAAGTTGCTACAAATAACTTCTCTGATGAAAACAAGCTTGGACAAGGAGGATTTGGACCAGTTTACAAGGGCATGCTCTTCGAAGGGAAAGAGATAGCAGTAAAAAGGTTGTCTAGTAATTCTGGACAAGGGGATATTGAATTTAAGAATGAAGTACAATTAATGGTCAGGCTTCAACACCGAAATTTAGTTAGACTCCTTGGTTTTTGTTTGAAACAAAAGGAACGACTTCTAGTATATGAGCTTCTTCCTAATAAAAGTCTCGATCACTTTTTATTTGATCCTATTAGACGTGCACAACTAAGATGGAAAACACGTTACAAAATTATTGGAGGAATTGCAAGTGGCCTTCTTTACCTTCATGAAGAATCTCAACAACGAATTGTTCATCGTGATCTTAAAGCAAGTAATATTCTCTTAGATGCGGATATGAATCCTAAGATTTCAGATTTTGGCATGGCAAGATTATTTGTTACAGATCAAACTCAAGCCAACACAGACAGAGTTGCGGGAACCTATGGGTATATGGCGCCAGAGTATGCAAGACATGGAAGATTCTCAACAAAGTCTGATGTCTTCAGTTTTGGTGTATTGATTCTAGAGATTGTGAGTGGCCAGAAGAATGGTGGCTTTCATAATTTGGAGAATGTAGAGCATCTACCAAGTTTGGCATGGAAAAGCTGGAGGAAAGGCAAAGCCTCTAACATTATAGATCCCACGTTAAGAGATGGTTCAAGAAATGAAATAATGAGATGCCTTCACATTGGTTTACTATGTGTTCAAGAAAAAGCTGCAGACAGACCAACCTTGGCTTCCCTTGTGCTTATGCTCAGCAGCCACTCCTTCTCACTTCAAGAACCCATGAAACCTGCATTTTTTATGAATGACACAAGTTTATCTGGCAGAAACTCAAGGGATTACAGAGCTGTGTCAACAAGCTCCAGCAAGAAAAATAGTAAATCTGCAGAATCATTATCAGTGAATGAGGCCTCAATAACTGATATATATCCTCGATAA 1137 0.3852 MVMLLIFAWICVRVRKQGRKSPNDSTELTEESIQFEFDTIKVATNNFSDENKLGQGGFGPVYKGMLFEGKEIAVKRLSSNSGQGDIEFKNEVQLMVRLQHRNLVRLLGFCLKQKERLLVYELLPNKSLDHFLFDPIRRAQLRWKTRYKIIGGIASGLLYLHEESQQRIVHRDLKASNILLDADMNPKISDFGMARLFVTDQTQANTDRVAGTYGYMAPEYARHGRFSTKSDVFSFGVLILEIVSGQKNGGFHNLENVEHLPSLAWKSWRKGKASNIIDPTLRDGSRNEIMRCLHIGLLCVQEKAADRPTLASLVLMLSSHSFSLQEPMKPAFFMNDTSLSGRNSRDYRAVSTSSSKKNSKSAESLSVNEASITDIYPR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5221g00010 378 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 375 - -
Pral5221g00010 378 ProSiteProfiles Protein kinase domain profile. 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5221g00010 378 Pfam Protein tyrosine and serine/threonine kinase 50 315 IPR001245 GO:0004672|GO:0006468
Pral5221g00010 378 MobiDBLite consensus disorder prediction 342 363 - -
Pral5221g00010 378 SUPERFAMILY Protein kinase-like (PK-like) 21 317 IPR011009 -
Pral5221g00010 378 FunFam Cysteine-rich receptor-like protein kinase 28 123 325 - -
Pral5221g00010 378 FunFam Cysteine-rich receptor-like protein kinase 10 12 122 - -
Pral5221g00010 378 SMART serkin_6 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5221g00010 378 CDD STKc_IRAK 53 317 - -
Pral5221g00010 378 Gene3D Phosphorylase Kinase; domain 1 10 122 - -
Pral5221g00010 378 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Pral5221g00010 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5221g00010 Pral-Chr5221 116157 118798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5221g00010 31 378 Receptor kinase-like Gene Family AT4G21410 57.102 9.48e-143 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5221g00010 PK_Tyr_Ser-Thr 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5221g00010 - - pcin:129293337 628.632