Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5221g00008 ATGTTCGACGAGTGCATGTTATCTTACTCAAACACTTCAATATTAGACAACGCGGTAGTCTTCTATATGTGGGACGAACACTTGGCAAGAAATTGGAATCAGTACAATCAGGTTCTTATGAGTTTGCTGCGGACTTTAAGTAGCATAGCTGCTTCTGGTGACTCCAGTCTAAAATTTGCTGCAGGACATGAAGAAGGACCTAACCTTCAAACCATATATGCTGTTGTTCAGTGCACGCCTAATTTGAGCGAGTCAGAATGCAAAAGCTGCTTGCTTTGGGCCATCTCAAAAATTCCAGAGCGCGGTAAAGATAGGCTAGCTCCGCCGACCCTACTGTCTCCTCCCCCATCCACCAACACAACCTTTTCATCACCTCCTCCATCTGCCGCCACAAGATCCTCGAAAGGAAAGAAATCACAAACTATCATTGCCCTTGTTGTGTCAACTTCTGCAATGGTTATGCTGCTTATCTTTGCTTGGATCTGTGTAAGAGTGAGAAAGCAAGGAAGGAAATCTCCAAATGATTCAACCGAACTTACTGAGGAGTCAATACAATTTGAATTTGACACCATCAAAGTTGCTACAAATAACTTCTCTGATGAAAACAAGCTTGGACAAGGAGGATTTGGACCAGTTTACAAGGGCATGCTCTTCGAAGGGAAAGAGATAGCAGTAAAAAGGTTGTCTAGTAATTCTGGACAAGGGGATATTGAATTTAAGAATGAAGTACAATTAATGGTCAGGCTTCAACACCGAAATTTAGTTAGACTCCTTGGTTTTTGTTTGAAACAAAAGGAACGACTTCTAGTATATGAGCTTCTTCCTAATAAAAGTCTCGATCACTTTTTATTTGATCCTATTAGACGTGCACAACTAAGATGGAAAACACGTTACAAAATTATTGGAGGAATTGCAAGTGGCCTTCTTTACCTTCATGAAGAATCTCAACAACGAATTGTTCATCGTGATCTTAAAGCAAGTAATATTCTCTTAGATGCGGATATGAATCCTAAGATTTCAGATTTTGGCATGGCAAGATTATTTGTTACAGATCAAACTCAAGCCAACACAGACAGAGTTGCGGGAACCTATGGGTATATGGCGCCAGAGTATGCAAGACATGGAAGATTCTCAACAAAGTCTGATGTCTTCAGTTTTGGTGTATTGATTCTAGAGATTGTGAGTGGCCAGAAGAATGGTGGCTTTCATAATTTGGAGAATGTAGAGCATCTACCAAGTTTGGCATGGAAAAGCTGGAGGAAAGGCAAAGCCTCTAACATTATAGATCCCACGTTAAGAGATGGTTCAAGAAATGAAATAATGAGATGCCTTCACATTGGTTTACTATGTGTTCAAGAAAAAGCTGCAGACAGACCAACCTTGGCTTCCCTTGTGCTTATGCTCAGCAGCCACTCCTTCTCACTTCAAGAACCCATGAAACCTGCATTTTTTATGAATGACACAAGTTTATCTGGCAGAAACTCAAGGGATTACAGAGCTGTGTCAACAAGCTCCAGCAAGAAAAATAGTAAATCTGCAGAATCATTATCAGTGAATGAGGCCTCAATAACTGATATATATCCTCGATAA 1590 0.4044 MFDECMLSYSNTSILDNAVVFYMWDEHLARNWNQYNQVLMSLLRTLSSIAASGDSSLKFAAGHEEGPNLQTIYAVVQCTPNLSESECKSCLLWAISKIPERGKDRLAPPTLLSPPPSTNTTFSSPPPSAATRSSKGKKSQTIIALVVSTSAMVMLLIFAWICVRVRKQGRKSPNDSTELTEESIQFEFDTIKVATNNFSDENKLGQGGFGPVYKGMLFEGKEIAVKRLSSNSGQGDIEFKNEVQLMVRLQHRNLVRLLGFCLKQKERLLVYELLPNKSLDHFLFDPIRRAQLRWKTRYKIIGGIASGLLYLHEESQQRIVHRDLKASNILLDADMNPKISDFGMARLFVTDQTQANTDRVAGTYGYMAPEYARHGRFSTKSDVFSFGVLILEIVSGQKNGGFHNLENVEHLPSLAWKSWRKGKASNIIDPTLRDGSRNEIMRCLHIGLLCVQEKAADRPTLASLVLMLSSHSFSLQEPMKPAFFMNDTSLSGRNSRDYRAVSTSSSKKNSKSAESLSVNEASITDIYPR 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5221g00008 529 SMART serkin_6 198 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5221g00008 529 SUPERFAMILY Protein kinase-like (PK-like) 172 468 IPR011009 -
Pral5221g00008 529 Gene3D Transferase(Phosphotransferase) domain 1 274 481 - -
Pral5221g00008 529 ProSiteProfiles Gnk2-homologous domain profile. 17 127 IPR002902 -
Pral5221g00008 529 FunFam Cysteine-rich receptor-like protein kinase 28 274 476 - -
Pral5221g00008 529 Gene3D - 16 107 IPR038408 -
Pral5221g00008 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Pral5221g00008 529 FunFam Cysteine-rich receptor-like protein kinase 10 163 273 - -
Pral5221g00008 529 Pfam Salt stress response/antifungal 33 99 IPR002902 -
Pral5221g00008 529 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 526 - -
Pral5221g00008 529 MobiDBLite consensus disorder prediction 493 514 - -
Pral5221g00008 529 ProSiteProfiles Protein kinase domain profile. 198 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5221g00008 529 Pfam Protein tyrosine and serine/threonine kinase 201 466 IPR001245 GO:0004672|GO:0006468
Pral5221g00008 529 Gene3D Phosphorylase Kinase; domain 1 161 273 - -
Pral5221g00008 529 MobiDBLite consensus disorder prediction 104 135 - -
Pral5221g00008 529 CDD STKc_IRAK 204 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5221g00008 Pral-Chr5221 116157 123786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5221g00008 2 529 Receptor kinase-like Gene Family AT4G21410 45.534 1.56e-163 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5221g00008 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5221g00008 - - pcin:129293337 647.121