Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5219g00004 ATGAAGGTTAAAGAGACATCTTGCAACAATGGAGACTCGGGATTTAATAAACTCGTTTCTTCATCCTCTGGACCAACCAGGAATGTCACTTGCGATTGCAGATTCCAAAACGGCAGCGTTTGCCATGTCACCCATATCCTGTTGAAAAGACTGAATATAGCAGGAGAAATACCCAGTGAATTTGGAAATCTTACACAACTGATTGAACTTGATCTCACTCGCAACTATCTCAATGGCACAATCCCAACAGTTTTTACGCGCATCCCTCTTGTCAATCTGTCCCTTTTGGGGAATCGCATTAGTGGTTTGATTCCCGCAGAATTGGGTAAAATTGCTACTCTGCAGGAGCTGGTCTTGGAAGATAATCAGCTTGGAGGACCTCTTCCTCAGAGTCTTGGAAATTTGCGCAACCTACGGAGATTACTTCTTTCTGCAAATTATTTTACTGGGATAATACCAGAAACGTTTGGAAATCTGAAGAACCTTACTGAATTTAGGATAGATGGGAGCAGTTTATCAGGGAAGATACCTAGTTTTATTGGTAACTGGACCAAAGTTACTATTCTGAATATGCAGGGCACAGGCATGGAAGGTCCAATTCCTTCCACCATATCCTTGCTGACTAACTTGAGAGAATTGAGAATATCGGACTTGAATGGAACAACTATGAGATTTCCTAATCTAAGGGATTTGAAGATTTTGGAACGACTAATATTGAGAAATTGCCTAATTGTTGGTCCCATTCCAAACGACTTCAGCGAGATGACAAAATTAAAGACTCTAGACCTGAGCTTTAACAGGTTGACTGGTCCAATCCCTGCTTCATTTCAGGACTTGGAATTTAATCACATGCTTCTGATGAACAATTTTTTGAGTGGAGCAATTCCTGGGTGGATGCTTAAGAACACACATAATACTGATTTATCTTACAACAATTTTACTGAGGCTTCTGCATCTCGTTGCCAGCTTTTGGATGTGAATTTGGCTTCTAGTCTCTCATCTTCAGTAAGCAATCCACTCTTGTGTTTGAAGAAGGGCCTACCTTGTGAGGGGAAGTCAGATTATCATTCGTTATTCATAAACTGTGGAGGACCCAAGATGAAGTTCAATGGTCACGAATACGAAGACGATTTAAATCCAGATGGCATTTCATTCTTTAATTTTCAAAACAACTGGGCTTATAGCAGTACAGGAGTCTTCATGAATAATGATAGTGCTGCTTTTGTAGCAACAAATTCATCTTCCTTGAATGGGAGTAGCCCAGAATACTACCAAACAGCCCGTCTTAGCCCTCTATCCCTTAAGTACTATGGCTTATGTATGATGAAGGGCAAGTATAAAGTAAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAAACATATAGCAGCCTTGGTGTGCGCATATTTGATGTTTCAATTCAGGGCGTTAAATACTTGAAAGATTTTAACATTGCGAAGGCAGCAGGTGGAGTTGGTAAGGGCATCACAAGGGAATTTGATGTTTATGTGAATGATAGCACCTTGGAGATCCATTTATACTGGGCAGGGAAAGGAACTACTGCTATTCCCGATAGAGGTGTATATGGACCCCTAATATCTGCCATTACTGTGACGCCAAACTTCAAAGTTCCTTCAAAAGGGTTGTCCACTGGAGCTATTGTTGGAATTGTAGTTGGATCATGTGTTTTCCTCGTATTGGTACTCTTTGTCCTCCAAAAGAAAGGTTTCCTTGGTGGGAAAGATCCAAAAGATAAAGAACTTTTAGATCTTAAGACAGGCTATTTTTCTCTTAGACAAATTAAAACAGCCACCAATAACTTTGACCCAGCAAATAAGATAGGAGAAGGAGGATTTGGGCCAGTGTATAAGGGTGTGCTGTCAGATGGTGTAGTCATTGCTGTAAAGCAGCTCTCTTCCAAGTCAAAGCAAGGGAATCGTGAATTTGTTAATGAGATAGGAATGATCTCTGCATTGCAGCACCCGAATCTTGTGAAGCTTTATGGTTGTTGCATAGATGGAAATCAACTAATGCTTTTATACGAATACATGGAGAATAATTGTCTTGCTCGAGCACTTTTTGGCCGCGAAGAACAGAGAATATACTTGGGTTGGTCCACAAGATTGAAGATTTGTTTGGGGATAGCAAGGGGATTGGCTTATCTTCATGAGGAGTCTAGATTAAAAATAGTGCATAGGGACATTAAGGCAACAAACATCTTACTCGATAAGGACTTAAATGCCAAAATTTCTGATTTTGGCCTAGCGAAGCTCGATGAAGAGGAGAATACGCATATCAGCACCCGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGAGAGGTTATTTGACGGACAAAGCAGATGTATATAGCTTTGGAGTTGTTGCTTTGGAAATTGTTAGTGGAAAGAACAACATGAATTACCGGCCAAAGGATGAGTTTGTTCATCTTCTTGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGAACTAGTGGATCCGCGTCTTGGTTCAAGCTACTCCCAAGATGAGGCCATGAGAATGCTCAACTTGGCTCTTTTGTGCACCAACCCATCTCCCACCCTCAGGCCAGCCATGTCATCCGTAGTGAGTATGCTTGAAGGAAATATTCCAGTTCAAGCTCCAATAATCAAGCTCAAGGATTCAAGCCAGGATCATCAGGATGCAAGATTCAAAGCCTTTGAGATGCTATCACACGACAGCCAGACCTCTATAGCTTCTCAAACAAGCAGGGAGCAAAGAGGCAAGTCAATGGATGGGCCATGGATTGATTCTTCAATATCTCTTCCGAGTACAGATGATTACTCTTCATCTAGCAAGCTTCTTTGA 2871 0.4124 MKVKETSCNNGDSGFNKLVSSSSGPTRNVTCDCRFQNGSVCHVTHILLKRLNIAGEIPSEFGNLTQLIELDLTRNYLNGTIPTVFTRIPLVNLSLLGNRISGLIPAELGKIATLQELVLEDNQLGGPLPQSLGNLRNLRRLLLSANYFTGIIPETFGNLKNLTEFRIDGSSLSGKIPSFIGNWTKVTILNMQGTGMEGPIPSTISLLTNLRELRISDLNGTTMRFPNLRDLKILERLILRNCLIVGPIPNDFSEMTKLKTLDLSFNRLTGPIPASFQDLEFNHMLLMNNFLSGAIPGWMLKNTHNTDLSYNNFTEASASRCQLLDVNLASSLSSSVSNPLLCLKKGLPCEGKSDYHSLFINCGGPKMKFNGHEYEDDLNPDGISFFNFQNNWAYSSTGVFMNNDSAAFVATNSSSLNGSSPEYYQTARLSPLSLKYYGLCMMKGKYKVKLHFAEIMFSDDQTYSSLGVRIFDVSIQGVKYLKDFNIAKAAGGVGKGITREFDVYVNDSTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFKVPSKGLSTGAIVGIVVGSCVFLVLVLFVLQKKGFLGGKDPKDKELLDLKTGYFSLRQIKTATNNFDPANKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIDGNQLMLLYEYMENNCLARALFGREEQRIYLGWSTRLKICLGIARGLAYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKNNMNYRPKDEFVHLLDWAYVLQEQGNLLELVDPRLGSSYSQDEAMRMLNLALLCTNPSPTLRPAMSSVVSMLEGNIPVQAPIIKLKDSSQDHQDARFKAFEMLSHDSQTSIASQTSREQRGKSMDGPWIDSSISLPSTDDYSSSSKLL 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5219g00004 956 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 152 219 - -
Pral5219g00004 956 MobiDBLite consensus disorder prediction 916 956 - -
Pral5219g00004 956 CDD STKc_IRAK 615 882 - -
Pral5219g00004 956 SMART LRR_typ_2 255 278 IPR003591 -
Pral5219g00004 956 SMART LRR_typ_2 135 158 IPR003591 -
Pral5219g00004 956 SMART LRR_typ_2 64 87 IPR003591 -
Pral5219g00004 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Pral5219g00004 956 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 920 - -
Pral5219g00004 956 Gene3D Phosphorylase Kinase; domain 1 580 684 - -
Pral5219g00004 956 Pfam Protein tyrosine and serine/threonine kinase 613 877 IPR001245 GO:0004672|GO:0006468
Pral5219g00004 956 MobiDBLite consensus disorder prediction 938 956 - -
Pral5219g00004 956 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 133 163 IPR000225 GO:0005515
Pral5219g00004 956 SMART serkin_6 609 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5219g00004 956 FunFam Putative LRR receptor-like serine/threonine-protein kinase 685 892 - -
Pral5219g00004 956 Pfam Malectin domain 358 537 IPR021720 -
Pral5219g00004 956 Gene3D Transferase(Phosphotransferase) domain 1 685 899 - -
Pral5219g00004 956 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 355 542 - -
Pral5219g00004 956 SUPERFAMILY Protein kinase-like (PK-like) 594 899 IPR011009 -
Pral5219g00004 956 Gene3D Ribonuclease Inhibitor 113 181 IPR032675 -
Pral5219g00004 956 Gene3D Ribonuclease Inhibitor 5 112 IPR032675 -
Pral5219g00004 956 Pfam Leucine Rich Repeat 257 279 IPR001611 GO:0005515
Pral5219g00004 956 SUPERFAMILY L domain-like 37 314 - -
Pral5219g00004 956 ProSiteProfiles Protein kinase domain profile. 609 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5219g00004 956 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 581 684 - -
Pral5219g00004 956 Gene3D - 355 542 - -
Pral5219g00004 956 Gene3D Ribonuclease Inhibitor 182 340 IPR032675 -
Pral5219g00004 956 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5219g00004 Pral-Chr5219 71493 80567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5219g00004 1 947 Receptor kinase-like Gene Family AT1G53440 63.580 0.0 1210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5219g00004 PK_Tyr_Ser-Thr 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5219g00004 - - qsa:O6P43_001071 1304.66