Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5219g00002 ATGTCAAGCTCCAAACTTGTCTCTGTTTTCTTCTTTGGATTTTTGCTTCTCTGTTCCTTCACAGACTCTCCTGCAAGCGCTCAACTTATACCCCAAGATGAAGTGAAAACTCTTCAGGCAATATCTGATAAATGCAACAACGTAAATTGGACGGTTACACGGAGATCTTGCATTAATGCGACGGCTGGATTTAATAATTACATGATTAATATGTCCCTACCCAGTCCTCACATCCAAATTGCCAGCAATGTCACTTGCGATTGCTCCTTCCAAAGCGGCACCGTTTGCCATGTCACTAATCTTTTGTTGAGAGGCCTGAATATATCTGGAGTTATCCCCACTGAACTTGGAGATCTCACCCAGCTGAATATCCTTGATCTCCATTACAACTATCTGAATGGTACAATTCCAACGTACTTTACTCGCATCCCTATTACCAATCTGGCCATTGTGGGGAATCGAATTAGTGGTTCAGTTCCTTCTGTGTTTGGTGAAATTGCTACTCTACAGGAGCTGGCCTTGGAAGATAATCGGCTCGGAGGACATCTTCCTCAAAGTCTTGGAAATTTGCGTAACTTACGAAGATTACTTCTTTCTGCAAATAATTTTACAGGGATAATACCAGAAACGTTTGGAAATCTCAAGAACCTTACTGATTTTAGGATAGATGGGAGCACATTATCAGGGAAGATACCAAGTTTTATTGGGAATTGGACAGAATGTATTTATTTGAATATGCAGGGCACAGGCATGGAAGGGCCCATTCCTTCCACCATATCTTTGTTGAAAAATTTGAAAGAATTGAGAATATCTGATTTGAGTGGAAACACAACCATGAAATTTCCTAATTTGAAGCATATGAAGATTTTGGAACGACTGGTACTGAGAAATTGCTTAATTACTGGTGACATTCCAAAGTACATTGGCGAAATGAAAAACTTGAAGACTTTAGACCTGAGTTTTAACAGATTGACTGGTTCAATACCTAACTCATTTCAAGAGTTGCATTTTAATCACATGTTTCTGGCAAACAATTATCTGAATGGAACAATTCAAGAATGGGTGGTGGAGAACAGAAATAATATTGATTTATCACATAACAATTTTACTAAGGTTTCTACATCTAATTGCCAGAACTTGCAAGTGAACTTAGCTGCTAGTCTTTCATCAGCAGGAAAAAATGCAACCTTCTGTTTCAAGAAGGGCCTACCTTGTCCAAGAACACCTCAATATAACTCGTTGTTCATTAACTGTGGAGGACCAAAGATGAAGTTTGAGGGGAATGAATATGAAGAAGATTCCAATGCAAATGGCATTTCGTACTTCAATATCAAAGATGACAAATGGGCTTATAGCAGCACAGGAACATATATATTTAATGATAAAGCTGATTATGTAACAAGTGTGACAAAAAATGAGTTTTCTTTGAATGTTAATGGCTCAGAATACTACCAAACAGCCCGTCTCAGCCCTTCGTCACTTAAGTACTATGGACTATGCATGCTAAACGGTAGTTATAAAGTAAAGCTCCACTTTGCAGAGATAATGTTTTCTGATGACCAAACATTTAGCAGCCTTGGTACACGCATATTCAATGTTTCAATTCAAGGTTTGAAATACTTGAAAGATTTTAATATTGCGGAGGAAGCTGGTGGAGTTGGTAAGGGCATCACTAAGGAATTTGATGTTGATGTGAACGATACCACTTTGGAGATTCATTTATATTGGGCAGGGAAAGGAACTACTTCAATTCCCACTAGAGGTGTATACGGACCTCTGATATCAGCTATCACAGTGATGCCAAACTTTAAAGTTCCTTCACAAGGGCTCTCTGTTGATAACCAAAGGAATGAAAAAGGGTTTTCTGATGGAGCTGTTGTTGGAATTATGGTTGGATTATGTGTATTCCTCATACTGGTGTTACTCATTATCCTTCGAAAGAATGGTATCCTTTATGGGAAAGATTCACAAGACATAGATCTTAAGGGCTTGGATCTTAAAACCGGTATATTTACCTTAAAGGAAATCAAAGCAGCAACGAACAACTTCAATGCTGATAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGCATTCTCAAAGATGGCAGAATAATTGCAGTTAAGCAGCTATCTACTAAATCAAGGCAAGGAAATCGTGAATTTCTAAATGAAATAGGCATGATTTTTGCTTTGCAACACCCTTGTCTTGTTAAGCTTCATGGCTGTTGCGTTGAAGGAGATCAGTTGTTGCTCATATATGAGTTTATGGATAACAATAGTCTTGCTCGTGCTTTATTGGGCCCAAAAGAACTCCAGATAAAATTGGAGTGGCCAACAAGACACAAGATTTGTATTGGGATTGCGAGAGGTTTGGCTTACCTTCATGAAGAATCAAGATTTAAAATTGTTCATAGAGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACTCCAAGATATCTGATTTTGGTTTGGCCAAGCTTTATGAGGAGGAAAATACACACATTAGCACCAGAATTGCTGGAACTCGTGGTTATATGGCTCCTGAATATGCAATGCATGGATATTTGACTAAGAAAGCAGATGTTTATAGTTTTGGAATCGTTGCTTTGGAAATTATCAGTGGCAAGATCAACACCACTCAAAAGTCAGAGGAAGAATGCTTTTATCTGCGTGATTGGGCACATCAGTTGAGAGACGGAGGTAATTTGATGGATCTGGTGGATCCAAAGTTGGGTGAGGACTTTAATAGAGAGGAAATAATGACTATGATTGATGTGGCGCTCCAATGCACTGAAAACAATCCAAAACTTAGGCCTACCATGTCTAAAGTGCTTAGCATTCTTGAAGGCAGGCCTGCTGATCTGGAGGTAGTCTCAGATGATGAAAGTGAGATTATGGATGATGACTTGAAATTGAAATCGGCCATGAAAGAAGAAGCTGATAAAGATGAGACTAATCAGGCCATAAACTCGTCAAGCCATGAGTGTCAGACCACATCTCAACCCTTTTCAGAAGTCTATCAGGCCAGTAAAGATTCTTCTTCCTGGGAGAAAACCAACTAG 3081 0.3895 MSSSKLVSVFFFGFLLLCSFTDSPASAQLIPQDEVKTLQAISDKCNNVNWTVTRRSCINATAGFNNYMINMSLPSPHIQIASNVTCDCSFQSGTVCHVTNLLLRGLNISGVIPTELGDLTQLNILDLHYNYLNGTIPTYFTRIPITNLAIVGNRISGSVPSVFGEIATLQELALEDNRLGGHLPQSLGNLRNLRRLLLSANNFTGIIPETFGNLKNLTDFRIDGSTLSGKIPSFIGNWTECIYLNMQGTGMEGPIPSTISLLKNLKELRISDLSGNTTMKFPNLKHMKILERLVLRNCLITGDIPKYIGEMKNLKTLDLSFNRLTGSIPNSFQELHFNHMFLANNYLNGTIQEWVVENRNNIDLSHNNFTKVSTSNCQNLQVNLAASLSSAGKNATFCFKKGLPCPRTPQYNSLFINCGGPKMKFEGNEYEEDSNANGISYFNIKDDKWAYSSTGTYIFNDKADYVTSVTKNEFSLNVNGSEYYQTARLSPSSLKYYGLCMLNGSYKVKLHFAEIMFSDDQTFSSLGTRIFNVSIQGLKYLKDFNIAEEAGGVGKGITKEFDVDVNDTTLEIHLYWAGKGTTSIPTRGVYGPLISAITVMPNFKVPSQGLSVDNQRNEKGFSDGAVVGIMVGLCVFLILVLLIILRKNGILYGKDSQDIDLKGLDLKTGIFTLKEIKAATNNFNADNKIGEGGFGPVYKGILKDGRIIAVKQLSTKSRQGNREFLNEIGMIFALQHPCLVKLHGCCVEGDQLLLIYEFMDNNSLARALLGPKELQIKLEWPTRHKICIGIARGLAYLHEESRFKIVHRDIKATNVLLDKDLNSKISDFGLAKLYEEENTHISTRIAGTRGYMAPEYAMHGYLTKKADVYSFGIVALEIISGKINTTQKSEEECFYLRDWAHQLRDGGNLMDLVDPKLGEDFNREEIMTMIDVALQCTENNPKLRPTMSKVLSILEGRPADLEVVSDDESEIMDDDLKLKSAMKEEADKDETNQAINSSSHECQTTSQPFSEVYQASKDSSSWEKTN 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5219g00002 1026 Gene3D Phosphorylase Kinase; domain 1 653 758 - -
Pral5219g00002 1026 CDD STKc_IRAK 689 956 - -
Pral5219g00002 1026 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 207 274 - -
Pral5219g00002 1026 Pfam Leucine rich repeat 168 224 IPR001611 GO:0005515
Pral5219g00002 1026 Pfam Leucine rich repeat 290 347 IPR001611 GO:0005515
Pral5219g00002 1026 MobiDBLite consensus disorder prediction 985 1026 - -
Pral5219g00002 1026 SMART LRR_typ_2 311 334 IPR003591 -
Pral5219g00002 1026 SMART LRR_typ_2 190 213 IPR003591 -
Pral5219g00002 1026 SMART LRR_typ_2 119 142 IPR003591 -
Pral5219g00002 1026 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 34 206 - -
Pral5219g00002 1026 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 188 218 IPR000225 GO:0005515
Pral5219g00002 1026 ProSiteProfiles Leucine-rich repeat profile. 313 335 IPR001611 GO:0005515
Pral5219g00002 1026 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 652 758 - -
Pral5219g00002 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Pral5219g00002 1026 Gene3D Ribonuclease Inhibitor 59 167 IPR032675 -
Pral5219g00002 1026 Gene3D Ribonuclease Inhibitor 168 240 IPR032675 -
Pral5219g00002 1026 ProSiteProfiles Protein kinase domain profile. 683 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5219g00002 1026 Pfam Malectin domain 413 597 IPR021720 -
Pral5219g00002 1026 SUPERFAMILY Protein kinase-like (PK-like) 667 956 IPR011009 -
Pral5219g00002 1026 SMART serkin_6 683 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5219g00002 1026 Gene3D Ribonuclease Inhibitor 243 390 IPR032675 -
Pral5219g00002 1026 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 989 - -
Pral5219g00002 1026 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 602 - -
Pral5219g00002 1026 FunFam Putative LRR receptor-like serine/threonine-protein kinase 759 966 - -
Pral5219g00002 1026 Pfam Protein kinase domain 684 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5219g00002 1026 Gene3D Transferase(Phosphotransferase) domain 1 759 977 - -
Pral5219g00002 1026 Gene3D - 412 603 - -
Pral5219g00002 1026 SUPERFAMILY RNI-like 97 380 - -
Pral5219g00002 1026 MobiDBLite consensus disorder prediction 992 1026 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5219g00002 Pral-Chr5219 21945 38781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5219g00002 25 957 Receptor kinase-like Gene Family AT1G53440 57.463 0.0 1080
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5219g00002 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5219g00002 - - qsa:O6P43_001071 1171.76