Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5219g00001 ATGTCAAGCTCCAAACTTGTCTCTGTTTTCTTCTTTGGATTTTTGCTTCTCTGTTCCTTCACAGACTCTCCTGCAAGCGCTCAACTTATACCCCAAGATGAAGTGAAAACTCTTCAGGCAATATCTGATAAATGCAACAACGTAAATTGGACGGTTACACGGAGATCTTGCATTAATGCGACGGCTGGATTTAATAATTACATGATTAATATGTCCCTACCCAGTCCTCACATCCAAATTGCCAGCAATGTCACTTGCGATTGCTCCTTCCAAAGCGGCACCGTTTGCCATGTCACTAATCTTTTGTTGAGAGGCCTGAATATATCTGGAGTTATCCCCACTGAACTTGGAGATCTCACCCAGCTGAATATCCTTGATCTCCATTACAACTATCTGAATGGTACAATTCCAACGTACTTTACTCGCATCCCTATTACCAATCTGGCCATTGTGGGGAATCGAATTAGTGGTTCAGTTCCTTCTGTGTTTGGTGAAATTGCTACTCTACAGGAGCTGGCCTTGGAAGATAATCGGCTCGGAGGACATCTTCCTCAAAGTCTTGGAAATTTGCGTAACTTACGAAGATTACTTCTTTCTGCAAATAATTTTACAGGGATAATACCAGAAACGTTTGGAAATCTCAAGAACCTTACTGATTTTAGGATAGATGGGAGCACATTATCAGGGAAGATACCAAGTTTTATTGGGAATTGGACAGAATGTATTTATTTGAATATGCAGGGCACAGGCATGGAAGGGCCCATTCCTTCCACCATATCTTTGTTGAAAAATTTGAAAGAATTGAGAATATCTGATTTGAGTGGAAACACAACCATGAAATTTCCTAATTTGAAGCATATGAAGATTTTGGAACGACTGGTACTGAGAAATTGCTTAATTACTGGTGACATTCCAAAGTACATTGGCGAAATGAAAAACTTGAAGACTTTAGACCTGAGTTTTAACAGATTGACTGGTTCAATACCTAACTCATTTCAAGAGTTGCATTTTAATCACATGTTTCTGGCAAACAATTATCTGAATGGAACAATTCAAGAATGGGTGGTGGAGAACAGAAATAATATTGATTTATCACATAACAATTTTACTAAGGTTTCTACATCTAATTGCCAGAACTTGCAAGTGAACTTAGCTGCTAGTCTTTCATCAGCAGGAAAAAATGCAACCTTCTGTTTCAAGAAGGGCCTACCTTGTCCAAGAACACCTCAATATAACTCGTTGTTCATTAACTGTGGAGGACCAAAGATGAAGTTTGAGGGGAATGAATATGAAGAAGATTCCAATGCAAATGGCATTTCGTACTTCAATATCAAAGATGACAAATGGGCTTATAGCAGCACAGGAACATATATATTTAATGATAAAGCTGATTATGTAACAAGTGTGACAAAAAATGAGTTTTCTTTGAATGTTAATGGCTCAGAATACTACCAAACAGCCCGTCTCAGCCCTTCGTCACTTAAGTACTATGGACTATGCATGCTAAACGGTAGTTATAAAGTAAAGCTCCACTTTGCAGAGATAATGTTTTCTGATGACCAAACATTTAGCAGCCTTGGTACACGCATATTCAATGTTTCAATTCAAGATTTTAATATTGCGGAGGAAGCTGGTGGAGTTGGTAAGGGCATCACTAAGGAATTTGATGTTGATGTGAACGATACCACTTTGGAGATTCATTTATATTGGGCAGGGAAAGGAACTACTTCAATTCCCACTAGAGGTGTATACGGACCTCTGATATCAGCTATCACAGTGATGCCAAACTTTAAAGTTCCTTCACAAGGGCTCTCTGTTGATAACCAAAGGAATGAAAAAGGGTTTTCTGATGGAGCTGTTGTTGGAATTATGGTTGGATTATGTGTATTCCTCATACTGGTGTTACTCATTATCCTTCGAAAGAATGGTATCCTTTATGGGAAAGATTCACAAGACATAGATCTTAAGGGCTTGGATCTTAAAACCGGTATATTTACCTTAAAGGAAATCAAAGCAGCAACGAACAACTTCAATGCTGATAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGCATTCTCAAAGATGGCAGAATAATTGCAGTTAAGCAGCTATCTACTAAATCAAGGCAAGGAAATCGTGAATTTCTAAATGAAATAGGCATGATTTTTGCTTTGCAACACCCTTGTCTTGTTAAGCTTCATGGCTGTTGCGTTGAAGGAGATCAGTTGTTGCTCATATATGAGTTTATGGATAACAATAGTCTTGCTCGTGCTTTATTGGGCCCAAAAGAACTCCAGATAAAATTGGAGTGGCCAACAAGACACAAGATTTGTATTGGGATTGCGAGAGGTTTGGCTTACCTTCATGAAGAATCAAGATTTAAAATTGTTCATAGAGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACTCCAAGATATCTGATTTTGGTTTGGCCAAGCTTTATGAGGAGGAAAATACACACATTAGCACCAGAATTGCTGGAACTCGTGGTTATATGGCTCCTGAATATGCAATGCATGGATATTTGACTAAGAAAGCAGATGTTTATAGTTTTGGAATCGTTGCTTTGGAAATTATCAGTGGCAAGATCAACACCACTCAAAAGTCAGAGGAAGAATGCTTTTATCTGCGTGATTGGGCACATCAGTTGAGAGACGGAGGTAATTTGATGGATCTGGTGGATCCAAAGTTGGGTGAGGACTTTAATAGAGAGGAAATAATGACTATGATTGATGTGGCGCTCCAATGCACTGAAAACAATCCAAAACTTAGGCCTACCATGTCTAAAGTGCTTAGCATTCTTGAAGGCAGGCCTGCTGATCTGGAGGTAGTCTCAGATGATGAAAGTGAGATTATGGATGATGACTTGAAATTGAAATCGGCCATGAAAGAAGAAGCTGATAAAGATGAGACTAATCAGGCCATAAACTCGTCAAGCCATGAGTGTCAGACCACATCTCAACCCTTTTCAGAAGTCTATCAGGCCAGTAAAGATTCTTCTTCCTGGGAGAAAACCAACTAG 3063 0.3901 MSSSKLVSVFFFGFLLLCSFTDSPASAQLIPQDEVKTLQAISDKCNNVNWTVTRRSCINATAGFNNYMINMSLPSPHIQIASNVTCDCSFQSGTVCHVTNLLLRGLNISGVIPTELGDLTQLNILDLHYNYLNGTIPTYFTRIPITNLAIVGNRISGSVPSVFGEIATLQELALEDNRLGGHLPQSLGNLRNLRRLLLSANNFTGIIPETFGNLKNLTDFRIDGSTLSGKIPSFIGNWTECIYLNMQGTGMEGPIPSTISLLKNLKELRISDLSGNTTMKFPNLKHMKILERLVLRNCLITGDIPKYIGEMKNLKTLDLSFNRLTGSIPNSFQELHFNHMFLANNYLNGTIQEWVVENRNNIDLSHNNFTKVSTSNCQNLQVNLAASLSSAGKNATFCFKKGLPCPRTPQYNSLFINCGGPKMKFEGNEYEEDSNANGISYFNIKDDKWAYSSTGTYIFNDKADYVTSVTKNEFSLNVNGSEYYQTARLSPSSLKYYGLCMLNGSYKVKLHFAEIMFSDDQTFSSLGTRIFNVSIQDFNIAEEAGGVGKGITKEFDVDVNDTTLEIHLYWAGKGTTSIPTRGVYGPLISAITVMPNFKVPSQGLSVDNQRNEKGFSDGAVVGIMVGLCVFLILVLLIILRKNGILYGKDSQDIDLKGLDLKTGIFTLKEIKAATNNFNADNKIGEGGFGPVYKGILKDGRIIAVKQLSTKSRQGNREFLNEIGMIFALQHPCLVKLHGCCVEGDQLLLIYEFMDNNSLARALLGPKELQIKLEWPTRHKICIGIARGLAYLHEESRFKIVHRDIKATNVLLDKDLNSKISDFGLAKLYEEENTHISTRIAGTRGYMAPEYAMHGYLTKKADVYSFGIVALEIISGKINTTQKSEEECFYLRDWAHQLRDGGNLMDLVDPKLGEDFNREEIMTMIDVALQCTENNPKLRPTMSKVLSILEGRPADLEVVSDDESEIMDDDLKLKSAMKEEADKDETNQAINSSSHECQTTSQPFSEVYQASKDSSSWEKTN 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5219g00001 1020 Gene3D Ribonuclease Inhibitor 243 390 IPR032675 -
Pral5219g00001 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 207 274 - -
Pral5219g00001 1020 SMART serkin_6 677 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5219g00001 1020 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 596 - -
Pral5219g00001 1020 SMART LRR_typ_2 190 213 IPR003591 -
Pral5219g00001 1020 SMART LRR_typ_2 311 334 IPR003591 -
Pral5219g00001 1020 SMART LRR_typ_2 119 142 IPR003591 -
Pral5219g00001 1020 MobiDBLite consensus disorder prediction 979 1020 - -
Pral5219g00001 1020 Pfam Leucine rich repeat 168 224 IPR001611 GO:0005515
Pral5219g00001 1020 Pfam Leucine rich repeat 290 347 IPR001611 GO:0005515
Pral5219g00001 1020 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 34 206 - -
Pral5219g00001 1020 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 188 218 IPR000225 GO:0005515
Pral5219g00001 1020 ProSiteProfiles Leucine-rich repeat profile. 313 335 IPR001611 GO:0005515
Pral5219g00001 1020 Gene3D Ribonuclease Inhibitor 59 167 IPR032675 -
Pral5219g00001 1020 Gene3D Ribonuclease Inhibitor 168 240 IPR032675 -
Pral5219g00001 1020 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 983 - -
Pral5219g00001 1020 Pfam Protein kinase domain 678 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5219g00001 1020 SUPERFAMILY RNI-like 97 380 - -
Pral5219g00001 1020 ProSiteProfiles Protein kinase domain profile. 677 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5219g00001 1020 Gene3D Transferase(Phosphotransferase) domain 1 753 971 - -
Pral5219g00001 1020 MobiDBLite consensus disorder prediction 986 1020 - -
Pral5219g00001 1020 Pfam Malectin domain 413 591 IPR021720 -
Pral5219g00001 1020 SUPERFAMILY Protein kinase-like (PK-like) 661 950 IPR011009 -
Pral5219g00001 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Pral5219g00001 1020 Gene3D - 412 597 - -
Pral5219g00001 1020 Gene3D Phosphorylase Kinase; domain 1 647 752 - -
Pral5219g00001 1020 CDD STKc_IRAK 683 950 - -
Pral5219g00001 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase 753 960 - -
Pral5219g00001 1020 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 646 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5219g00001 Pral-Chr5219 21945 38781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5219g00001 25 951 Receptor kinase-like Gene Family AT1G53440 57.356 0.0 1073
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5219g00001 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5219g00001 - - zju:107414276 1157.9