Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5218g00021 ATGGAGTACAACACGACTTTGAGAAAGATAGCTGGGAAACCAGGAAAGAAGGACTGGGACTTCAACGTAGATCCATGTACTGCTACTGGAACTCGTAACTGGACTAAAAACGACGAAGATAATGCTGTCGTCTGCATGCTTGTCCTCGTGCTGATGGTCTTTGTCATGTTATCAGCACATTTCGGTTTTCGGAAATCGGCTGACGGGAACGATCCCACCGGAGCTAGGAAACATTTCCACTCTTCTGAGTTTGGAAAATCCTCAGAGAACCATCTAAAAGGACAACGCTGTGGTTCGAAACACAGCGAGTTGGATGAGCAGAATGATAGAGAGAAGCATAGCGCAAGTGAAATGCTTGATGTTGAAATGGGAGGGATTGAGAATAACTTTAAAGTTCCTTCACAAGGGCTCTCTGTTGATAACCAAAGGAATGAAAAAGGGTTTTCTGCTGGAGCTGTTGTTGGAATTATGGTTGGATTATGTGTATTCCTCATACTGGTGTTACTCATTATCCTTCGAAAGAATGGTATCCTTTATGGGAAAGATTCACAAGACATAGATCTTAAGGGCTTGGATCTTAAAACCGGTATATTTACCTTAAAGGAAATCAAAGCAGCAATGAACAACTTCAATGCTGATAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGCATTCTCAAAGATGGCAGAATAATTGCAGTTAAACAGCTATCTACTAAATCAAGGCAAGGAAATCGTGAATTTCTAAATGAAATAGGCATGATTTTTGCTTTGCAACACCCTTGTCTTGTTAAGCTTCATGGCTGTTGCATTGAAGGAGATCACTTGTTGCTCATATATGAGTTTATGGATAACAATAGTCTTGCTCGCGCTTTATTGGGCCCAGAAGAACTCCAGATAAAATTGGAGTGGCCAACAAGACACAAGATTTGTATTGGGATTGCGAGAGGTTTGGCTTACCTTCATGAAGAATCAAGATTTAAAATTGTTCATAGAGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACCCCAAGATATCTGATTTTGGTTTGGCCAAGCTTTACGAGGAGGAAAATACACACATTAGCACCAGAATTGCTGGAACTTGTGGTTATATGGCTCCTGAATATGCAATGCATGGATATTTGACTAAGAAAGCAGATGTTTATAGTTTTGGAATCGTTGCTTTGGAAATTATCAGTGGCAAGATCAACACCACTCAAAAGTCAGAGGAAGAATGCTTTTATCTGCGTGATTGGGCACATCAGTTGAAAGACGGAGGTAATTTGATGGATATGGTGGATCCAAAGTTGGGTGAGGACTTTAATAGAGAGGAAATAATGACTATGATTGATGTGGCTCTCCAATGCACTGAAAACAATCCAAAACTTAGGCCTACCATGTCTAAAGTGCTTAGCATTCTTGAAGGCAGGCCTGCTGATCTGGAGGTAGTCTCAGATGTTGAAAGTGAGATTATGGATGATGACTTGAAATTGAAATCGGCCATGAAAGAAGAAGCTGATAAAGATGAGACTAATCAGGCCATAAACTCGTCAAGCCATGAGTGTCAGACCACATCTCAACCCCTTTTAGAATTCTATCAGGCCAGTAAAGATTCTTCTTCCTGA 1647 0.4062 MEYNTTLRKIAGKPGKKDWDFNVDPCTATGTRNWTKNDEDNAVVCMLVLVLMVFVMLSAHFGFRKSADGNDPTGARKHFHSSEFGKSSENHLKGQRCGSKHSELDEQNDREKHSASEMLDVEMGGIENNFKVPSQGLSVDNQRNEKGFSAGAVVGIMVGLCVFLILVLLIILRKNGILYGKDSQDIDLKGLDLKTGIFTLKEIKAAMNNFNADNKIGEGGFGPVYKGILKDGRIIAVKQLSTKSRQGNREFLNEIGMIFALQHPCLVKLHGCCIEGDHLLLIYEFMDNNSLARALLGPEELQIKLEWPTRHKICIGIARGLAYLHEESRFKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEENTHISTRIAGTCGYMAPEYAMHGYLTKKADVYSFGIVALEIISGKINTTQKSEEECFYLRDWAHQLKDGGNLMDMVDPKLGEDFNREEIMTMIDVALQCTENNPKLRPTMSKVLSILEGRPADLEVVSDVESEIMDDDLKLKSAMKEEADKDETNQAINSSSHECQTTSQPLLEFYQASKDSSS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5218g00021 548 ProSiteProfiles Protein kinase domain profile. 210 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00021 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 332 344 IPR008271 GO:0004672|GO:0006468
Pral5218g00021 548 FunFam Putative LRR receptor-like serine/threonine-protein kinase 286 493 - -
Pral5218g00021 548 Gene3D Phosphorylase Kinase; domain 1 180 285 - -
Pral5218g00021 548 MobiDBLite consensus disorder prediction 72 114 - -
Pral5218g00021 548 SUPERFAMILY Protein kinase-like (PK-like) 194 485 IPR011009 -
Pral5218g00021 548 SMART serkin_6 210 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00021 548 Pfam Protein kinase domain 211 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00021 548 MobiDBLite consensus disorder prediction 507 548 - -
Pral5218g00021 548 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 132 516 - -
Pral5218g00021 548 CDD STKc_IRAK 216 483 - -
Pral5218g00021 548 MobiDBLite consensus disorder prediction 519 548 - -
Pral5218g00021 548 Gene3D Transferase(Phosphotransferase) domain 1 286 502 - -
Pral5218g00021 548 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 179 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5218g00021 Pral-Chr5218 236423 247400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5218g00021 146 484 Receptor kinase-like Gene Family AT1G53430 66.176 1.49e-156 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5218g00021 Pkinase 5.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5218g00021 - - qsa:O6P43_001072 509.22