Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5218g00020 ATGATTTCTGCTTTGCAGCACCCCTATCTGGTTAAGCTTTATGGCTGTTGTGTTGAAGGAAATCAACTGCTGTTAATATATGAGTTCATGGATAATAATAGTCTTGCCCGTGCTTTATTTGGTTCGAAGGAACTTCAATTAAAGTTAGATTGGCCAACAAGACACAAGATTTGCATTGGGATTGCTAGAGGTTTAGCATTCCTCCACGAAGAATCAAGATTGAAGATTGTTCATAGAGACATTAAGGCCACTAATGTGCTACTTGATAAAGATCTCAATCCCAAGATATCTGATTTTGGTTTGGCCAAACTTGTTGAAGAGGACAATACTCACATAAGCACTCGAATTGCTGGCACTTATGGATACATGGCACCTGAATATGCGATGCATGGTTACTTAACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTCAGTGGGAGGGTCAACACCATTCACCGAGCAAAGGAGGAAGCAATCTATCTTCTTGACTGGGCACGTCTCTTGAAAGAAAAAGGGGAGTTGCTAGAGCTAGTTGATCGAAGGTTGGGCTCAAACTTTGACAAGGAGGAAGCGATGGTGATGATCCAAGTGGCTCTCTTGTGCACCAATGTCACCCCAGCTCTCAGGCCTACCATGTCTTCAGTGGTAAGCATGCTTGAAGGTAAAAGTGTGGTTGAGGAGATAGTTTCAGAGTCAAGTGAGGTATTGGACGAGAAGAAGTTGGAGGTAATGAGGATGTTATACAACCAGTTGGAAGACAATAAGATGACTGAGATTCAAGAACAAGGTACATCAGTGGACGAACCGTGGGCTGCTGCTTCAACATCAGCATCAGATCTCTATCCTCTGCATTTGGACTCCTCTTACTGGAATAAAAGAGACTAG 903 0.4252 MISALQHPYLVKLYGCCVEGNQLLLIYEFMDNNSLARALFGSKELQLKLDWPTRHKICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLVEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRVNTIHRAKEEAIYLLDWARLLKEKGELLELVDRRLGSNFDKEEAMVMIQVALLCTNVTPALRPTMSSVVSMLEGKSVVEEIVSESSEVLDEKKLEVMRMLYNQLEDNKMTEIQEQGTSVDEPWAAASTSASDLYPLHLDSSYWNKRD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5218g00020 300 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00020 300 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 250 - -
Pral5218g00020 300 Pfam Protein tyrosine and serine/threonine kinase 2 225 IPR001245 GO:0004672|GO:0006468
Pral5218g00020 300 Gene3D Transferase(Phosphotransferase) domain 1 31 245 - -
Pral5218g00020 300 SMART serkin_6 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00020 300 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Pral5218g00020 300 FunFam Putative LRR receptor-like serine/threonine-protein kinase 30 237 - -
Pral5218g00020 300 SUPERFAMILY Protein kinase-like (PK-like) 2 229 IPR011009 -
Pral5218g00020 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5218g00020 Pral-Chr5218 211017 219839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5218g00020 1 253 Receptor kinase-like Gene Family AT1G53420 72.835 7.34e-128 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5218g00020 PK_Tyr_Ser-Thr 2.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5218g00020 - - qsa:O6P43_001072 467.233