Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5218g00019 ATGGAGTTTGCGACGTCAAGCTCCAAATCTGTCTCAATTTTCTTCTTTGGATTTCTGCTTCTGATCAGTTTCTTCACAGATTTCCCATCCAACGCTCAACTTATTCCCCTACATGAAGTGGACACTCTTCAGGCAATATCTGATGAATACGACAACGTAAATTGGGCGGTTACACAGACATCTTGCATTAATGCAAATGAGGGATTTAATAATTACATTATTAATATGCATCAACTCAGTGATTTCTTTACACTTGCCAGCAATGTCACTTGCGATTGCTCCTTCCAAAACGGCACCGTTTGCCATGTCACTAATCTTATGCTGAGAGGCCTGAATATATATGGAGTTATCCCCGCTGAACTCGGAGATCTCACCCAGCTGAATATCATTGATCTCACTTACAACTATCTGAATGGTGCAATTCCAACGTATTTTACTCGCATCCCTATTACCAATCTGTCCATTGTGGGAAATCGAATTAGTGGTTCAATTCCTTCTGTGTTTGGTGAAATTGCTACTCTACAGGAGCTGGCCTTGGAAGATAATCAGCTCGGAGGACATCTTCCTCAAAGTTTTGGAAATTTGAGCAACTTACGAAGATTACTTCTTTCTGCAAATAATTTTACAGGGACAATACCAGAAACATTTGGAAATCTCAAGAACCTTACTGATTTTAGGATAGATGGGAGCACATTATCAGGGAAGATACCAAGTTTTATTGGGAATTGGACAGAATGTATTTATTTGAATATGCAGGGCACAGGCATGGAAGGCCCTATTCCTTCCACCATATCTTTGTTGAAAAATTTGAAAGAATTGAGAGTATCTGATTTGAGTGGAAACACAACTATGAAATTTCCTGATTTGAAGGATATGAAGAGTTTGCAACGACTGGTACTGAGAAATTGTTCAATTACTGGTGAAATTCCAAAGTACATTGGCGAAATGAAAGACTTAAAGACTTTGTTTCTGACAAACAATTATCTGAGTGGAAAAATTCCAGAATGGGTGGTGGAGAACAGAGAATATATTGATTTATCATATAACAATTTTACTGAGGTTTCTACATCTAATTGCCAGAACTTGCAAGTGAACTTAGCTTCCAGTCTTTCATCATCAGGAACAAATGCAACCTTCTGTTTCAAGAAGGGCCTACCTTGTCCAAGAACACCTCAATATAACTCGTTGTTCATTAACTGTGGAGGACCAAAGATGAAGTTTGAGGGGAATGAATATGAAGAAGATCCCAATCCAGATGGCATTTCGTACTTCAATATCAAAGATGACAAATGGGCTTATAGCAGCACAGGAACATATATATTTAATGATAAAGCTGATTATGTAACAAGTGTGACAAAAAATAAGTTTTCTTTGTTTGTTAATGGCTCAGAATACTATCAAACAGCCCGTCTCAGCCCTTCGTCACTTAAGTATTATGGCCTATGCATGCTGAAGGGTAATTATAAAGTAAAGCTCCACTTTGCAGAGATAATGTTTTCAGGTGACCAAAAATTTAGCAGCCTTGGTACACGCATATTCGATGTTTCAATTCAAGGTTTGAAATACTTGAAAGATTTTAATATTGCGAAGGAAGCTGGTGGAGTTGGTCAGGGCATCACTAAGGAATTTGATGTTGATGTGAACGATAGCACTTTGGAGATTCATTTATATTGGGCAGGGAAAGGAACTACTGCAATTCCCACTAGAGGTGTATACGGACCTCTAATATCTGCTATCACAGTGATGCCAAACTTCAAAGTTCCTTCACAAAGGAATGAAAAAGGGTTTTCTGCCGGAGCTGTTGTTGGAATTGTGGTTGGATTATGTGCATTCCTCATACTGGTGTTACTCATTATCCTTCGAAAGAATGGTTTCCTTGATAGGAAAGATTCACAAGACATAGATCTTAAGGGCTTGGATCTTAAAACTGGTATATTTACCTTAAAGGAAATCAATGCAGCAACCAACAACTTCAATGCTGACAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGCATTCTCAAAGATGGCAGAATAATTGCAGTTAAGCAGCTATCTGCTAAATCAAGGCAAGGAAATCGTGAATTTCTAAATGAAATAGGCATGATTTTTGCTTTGCAACACCCTTGTCTTGTTAAGATTTATGGCTGTTGCGTTGAAGGAGACCAGTTGTTGCTCATATATGAGTTTATGGATAACAATAGTCTTGCTTATGCTTTATTGGGCCCAGAAGAACTCCAAATAAAATTGGAGTGGCCAACAAGACACAAGATTTGTGTTGGGATTGCTAGAGGTTTGGCTTACCTTCATGAAGAATCAAGATTTAAAATTGTTCATAGAGATATCAAGGCTACTAATGTGTTGCTTGATAAAGACCTCAACCCCAAGATATCTGATTTTGGTTTGGCCAAGCTTTACGAGGAGGAAAATACACACATTAGCACCAGAATTGCTGGAACTCGTGGTTATATGGCTCCTGAATATGCAATGCATGGATATTTGACTAAGAAAGCAGATGTTTATAGTTTTGGAATCGTTGCTTTGGAAATTATCAGTGGCAAGGTCAACACCACGCAAAAGTCAGAGGATGAATGCTTTTATTTGCGTGATTGGGCACATCAGTTGAAAGACGGAGGTAATCTGATGGATTTGGTGGATCCAAAGTTGGGTGAGGACTTTAATAGAGAGGAAATAATGACTGTGATTGATATGGCTCTCCAATGCACTGAAAACTCTCCAAAACTCAGGCCTACCATGTCTAAAGTGCTTAGCATTCTTGAAGGCAGGCCTGCTGATCTGGAGGTAGTCTCAGATGATGAAAGTGAGATTATGGATGATGACTTGAAACTGAAATTGGTCATGAAAGAAGAAGCTGATAAAGATGAGACTAATCAGGCCATAAACTCGTCAACCCATGGCCAGTAA 2934 0.3875 MEFATSSSKSVSIFFFGFLLLISFFTDFPSNAQLIPLHEVDTLQAISDEYDNVNWAVTQTSCINANEGFNNYIINMHQLSDFFTLASNVTCDCSFQNGTVCHVTNLMLRGLNIYGVIPAELGDLTQLNIIDLTYNYLNGAIPTYFTRIPITNLSIVGNRISGSIPSVFGEIATLQELALEDNQLGGHLPQSFGNLSNLRRLLLSANNFTGTIPETFGNLKNLTDFRIDGSTLSGKIPSFIGNWTECIYLNMQGTGMEGPIPSTISLLKNLKELRVSDLSGNTTMKFPDLKDMKSLQRLVLRNCSITGEIPKYIGEMKDLKTLFLTNNYLSGKIPEWVVENREYIDLSYNNFTEVSTSNCQNLQVNLASSLSSSGTNATFCFKKGLPCPRTPQYNSLFINCGGPKMKFEGNEYEEDPNPDGISYFNIKDDKWAYSSTGTYIFNDKADYVTSVTKNKFSLFVNGSEYYQTARLSPSSLKYYGLCMLKGNYKVKLHFAEIMFSGDQKFSSLGTRIFDVSIQGLKYLKDFNIAKEAGGVGQGITKEFDVDVNDSTLEIHLYWAGKGTTAIPTRGVYGPLISAITVMPNFKVPSQRNEKGFSAGAVVGIVVGLCAFLILVLLIILRKNGFLDRKDSQDIDLKGLDLKTGIFTLKEINAATNNFNADNKIGEGGFGPVYKGILKDGRIIAVKQLSAKSRQGNREFLNEIGMIFALQHPCLVKIYGCCVEGDQLLLIYEFMDNNSLAYALLGPEELQIKLEWPTRHKICVGIARGLAYLHEESRFKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEENTHISTRIAGTRGYMAPEYAMHGYLTKKADVYSFGIVALEIISGKVNTTQKSEDECFYLRDWAHQLKDGGNLMDLVDPKLGEDFNREEIMTVIDMALQCTENSPKLRPTMSKVLSILEGRPADLEVVSDDESEIMDDDLKLKLVMKEEADKDETNQAINSSTHGQ 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5218g00019 977 Gene3D Transferase(Phosphotransferase) domain 1 734 951 - -
Pral5218g00019 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Pral5218g00019 977 ProSiteProfiles Protein kinase domain profile. 658 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00019 977 Gene3D Phosphorylase Kinase; domain 1 626 733 - -
Pral5218g00019 977 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 212 279 - -
Pral5218g00019 977 Gene3D Ribonuclease Inhibitor 206 281 IPR032675 -
Pral5218g00019 977 Gene3D Ribonuclease Inhibitor 77 205 IPR032675 -
Pral5218g00019 977 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 393 584 - -
Pral5218g00019 977 Pfam Protein kinase domain 659 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00019 977 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 959 - -
Pral5218g00019 977 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 39 211 - -
Pral5218g00019 977 SUPERFAMILY L domain-like 94 363 - -
Pral5218g00019 977 SMART serkin_6 658 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00019 977 FunFam Putative LRR receptor-like serine/threonine-protein kinase 734 941 - -
Pral5218g00019 977 SUPERFAMILY Protein kinase-like (PK-like) 642 931 IPR011009 -
Pral5218g00019 977 Pfam Leucine rich repeat 151 208 IPR001611 GO:0005515
Pral5218g00019 977 Pfam Malectin domain 395 579 IPR021720 -
Pral5218g00019 977 Gene3D - 394 585 - -
Pral5218g00019 977 CDD STKc_IRAK 664 931 - -
Pral5218g00019 977 Gene3D Ribonuclease Inhibitor 282 383 IPR032675 -
Pral5218g00019 977 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 627 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5218g00019 Pral-Chr5218 136690 145162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5218g00019 14 932 Receptor kinase-like Gene Family AT1G53440 55.136 0.0 1036
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5218g00019 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5218g00019 - - qsa:O6P43_001071 1154.43