Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5218g00018 ATGCTCAACTCATACCCCAACAGGAAGGCAATATCTGATAAGCTGACAAATGTGAAGTGGAAGGTGACACCAACATCTTGTATTAATGGAGATGGATTTGATAACCTCTTTGCTTCATCCTATGGAGTGACGAGGAATGTCACCTGCAGTTGCAATTTCCAGCACGGCACCGTTTGCCATGTCACCAATATCCTGTTGAAAAGCCAAAATATAGCAGGGGAGATACCCAGTGAATTTGGAAATCTCACCCATTTGACTGAACTTGATCTTTATCTCAACTATCTCAGTGGCCCAATTCCAACGTCTTTTAGGCATATCCCTCTCGTCACTCTGTCCCTTGCGGGGAATCGCATTAGCGGTTCAATTCCCGTTGAGTTGGGTGAAATTGCTAGTCTGAAGGATTTGAACCTAGAAGATAATCAGCTTGGAGGACCTCTTCCTCATAGTCTTGGAAAGTTGCCCACCTTACGGAGAATACGTCTTTCTGCAAATAATTTTACTGGAACAATACCAGAAACGTTTGGAAATCTGAAGAACATGATTGATTTTTCTATAGATGGGAGTACCTTATCAGGAAAGATACCAAGTTTGATTGGGAACTGGACCAAAATTCTCTCTATGGATATGGAGGGCACAGGCATGGAAGGCCCGATTCCTTCCACCATATCATTGTTGACAAATTTGAAAGAATTGAGAATATCTGACTTGAAAGGAACAACAACGATGACATTTCCTAATCTGAAGAATTTGATGAGTTTGGAACGACTGATATTAAGGAATTGCTTAATTACTGGCCCCATTCCAACGTATATTGGTGAAATGAAAAACTTAAAGACTTTGGACCTGAGTTTTAACAAGTTGACCGGTTCAATCCCTGACTTATTTCAGAACTTGAATTTTGATCAGATGTTTCTGACGAACAATTCTCTGAGTGGGGCAATACCAGAATGGGTCCTACAGAGCAAATATAAGATGGATTTATCTTACAACAATTTTACCGAGGCTTCTACATCTACTTGCCAGATCTTACAAGTGAACTTAGCTTCCAGTCTTTCATCTTCAACAAGAAATGCAACCTTTTGCTTGAGGAAGGGCCTACCTTGTCCAGGAAAACCTCAGTATCATTCATTGTTTATAAATTCTGGAGGACCCAAGATGGAGTTTCAGAAGAATGAATATGAAGAAGATATCAATCAAAATGGCGTTTCATACTTCTATATAAAAGATGACAAATGGGCTTACAGCAGCACAGGAACATATATATATGATGATAAAGCTGATTACGTAGCCAGTGTACAAACAAATAAGTTTTCTTTGAATGTTAATGGCTCAGAATACTACCAAACAGCACGTCTCAGCCCTCAATCACTTAAGTACTATGGCCTCTGTATGATGAAGGGTAATTATAAAGTAAGGCTCCATTTTGCTGAGATAATGTTTTCTGACGACCAGACATTTAACAGTCTTGGAACTCGCATATTTGATGTTTCAATTCAAGGTTTCAAATACTTGAAAGATTTTAACATTGCAAAGGAAGCTGGTGGAGCTGGTAAGGGCATCACAAGAGAATTCAATGTTGATGTGAATGATACCACCTTGGAGATCCATTTATATTGGGCAGGGAAAGGTACTACAGCAATTCCCCAAAGAGGTGTATATGGACCTCTAATATCTGCCATCACTGTGACCCCAAACTTCAAAGTTCCTGCAAAAGGATTGTCTGTCGGAGCTATTGTTGGAATTGTGGTTGGATCATGCGGCTTCCTTGTACTTGTACTCATTGTCCTCAGAAAGAAGGGTTTCCTTGGTGGGGAAGATCCAAAAGATAGAGAACTTTTAGATCTGAAGACCGGTTATTTTCCTCTAAGACAAATTAAAAATGCAACCAATGACTTTGACCCTGCAAATAAGATAGGAGAAGGTGGCTTTGGGCCTGTGTATAAGGGTGTGCTGTCTGATGGTGTTGCCGTTGCTATTAAGCAACTATCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTTAATGAAATAGGAATGATATCTGCTTTGCAACATCCAAATCTGGTGAAGCTTTACGGTTGTTGCATAGAAGGAAATCAATTGTTGCTTATATATGAATACATGGAGAACAATTGCCTTGCTCGAGCACTTTTTGGCTGTGATGAACAACGGATACACTTGGACTGGCCCACAAGAGTAAAGATTTTTCTTGGGATAGCAAGGGGATTGGCTTATCTTCATGAGGAGTCAAGGTTAAAAATAGTACACAGGGACATTAAGGCGACAAACATCTTACTTGATAAAGAACTAAATGCCAAAATCTCTGATTTTGGTTTAGCGAAGCTTGACGAAGGAGAAAATACCCACATCATCACCCGAGTAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGAGAGGTTACTTGACAGATAAAGCAGATGTTTATAGCTTCGGAGTTGTTGCTTTGGAAATTATTAGTGGAAAGAGCAACGCAAGTTACGTGCCAATGGATGACTTTGTTCATCTTCTTGATTGGGCCTATGTTCTCCAAGAGGAAGAAAAGCTTTTAGAGTTGGTGGATCCACGTCTTGGTTTAAACTACTCCCAAGATGAAGCCATGAGAATGCTAAATTTGGCTCTTTTGTGCACTAATCTATCTCCCACCCTCAGACCCTCCATGTCATCTGTAGTGAGCATGCTTGAGGGAAAAACTCCAATCCAAGCACCAATAAACAAGCATAGAGATCAATATGCAAGGTTCAAAATGCTGTCGTATGACAGCCAGACATTTGTAGCCTCTCAATCAAGTACGGAACAAAGAGGCAAGTCAACGGATGGGTCATGGGTTGACTCCCCAATATCTCTTCCGAGTAAGGATGATTTTTCTTCATCTAATAAGCTTCTTGAAGATTAA 2922 0.4021 MLNSYPNRKAISDKLTNVKWKVTPTSCINGDGFDNLFASSYGVTRNVTCSCNFQHGTVCHVTNILLKSQNIAGEIPSEFGNLTHLTELDLYLNYLSGPIPTSFRHIPLVTLSLAGNRISGSIPVELGEIASLKDLNLEDNQLGGPLPHSLGKLPTLRRIRLSANNFTGTIPETFGNLKNMIDFSIDGSTLSGKIPSLIGNWTKILSMDMEGTGMEGPIPSTISLLTNLKELRISDLKGTTTMTFPNLKNLMSLERLILRNCLITGPIPTYIGEMKNLKTLDLSFNKLTGSIPDLFQNLNFDQMFLTNNSLSGAIPEWVLQSKYKMDLSYNNFTEASTSTCQILQVNLASSLSSSTRNATFCLRKGLPCPGKPQYHSLFINSGGPKMEFQKNEYEEDINQNGVSYFYIKDDKWAYSSTGTYIYDDKADYVASVQTNKFSLNVNGSEYYQTARLSPQSLKYYGLCMMKGNYKVRLHFAEIMFSDDQTFNSLGTRIFDVSIQGFKYLKDFNIAKEAGGAGKGITREFNVDVNDTTLEIHLYWAGKGTTAIPQRGVYGPLISAITVTPNFKVPAKGLSVGAIVGIVVGSCGFLVLVLIVLRKKGFLGGEDPKDRELLDLKTGYFPLRQIKNATNDFDPANKIGEGGFGPVYKGVLSDGVAVAIKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNCLARALFGCDEQRIHLDWPTRVKIFLGIARGLAYLHEESRLKIVHRDIKATNILLDKELNAKISDFGLAKLDEGENTHIITRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIISGKSNASYVPMDDFVHLLDWAYVLQEEEKLLELVDPRLGLNYSQDEAMRMLNLALLCTNLSPTLRPSMSSVVSMLEGKTPIQAPINKHRDQYARFKMLSYDSQTFVASQSSTEQRGKSTDGSWVDSPISLPSKDDFSSSNKLLED 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5218g00018 973 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 5 169 - -
Pral5218g00018 973 MobiDBLite consensus disorder prediction 935 965 - -
Pral5218g00018 973 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Pral5218g00018 973 SMART serkin_6 632 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00018 973 Pfam Protein tyrosine and serine/threonine kinase 636 903 IPR001245 GO:0004672|GO:0006468
Pral5218g00018 973 MobiDBLite consensus disorder prediction 935 973 - -
Pral5218g00018 973 Gene3D Phosphorylase Kinase; domain 1 605 707 - -
Pral5218g00018 973 ProSiteProfiles Leucine-rich repeat profile. 276 298 IPR001611 GO:0005515
Pral5218g00018 973 Gene3D Ribonuclease Inhibitor 12 173 IPR032675 -
Pral5218g00018 973 SMART LRR_typ_2 274 297 IPR003591 -
Pral5218g00018 973 SMART LRR_typ_2 82 105 IPR003591 -
Pral5218g00018 973 SMART LRR_typ_2 153 176 IPR003591 -
Pral5218g00018 973 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 604 707 - -
Pral5218g00018 973 Pfam Malectin domain 377 560 IPR021720 -
Pral5218g00018 973 Pfam Leucine rich repeat 252 310 IPR001611 GO:0005515
Pral5218g00018 973 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 939 - -
Pral5218g00018 973 SUPERFAMILY L domain-like 51 333 - -
Pral5218g00018 973 Gene3D - 375 565 - -
Pral5218g00018 973 Gene3D Transferase(Phosphotransferase) domain 1 708 924 - -
Pral5218g00018 973 Gene3D Ribonuclease Inhibitor 182 361 IPR032675 -
Pral5218g00018 973 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 374 565 - -
Pral5218g00018 973 SUPERFAMILY Protein kinase-like (PK-like) 617 923 IPR011009 -
Pral5218g00018 973 FunFam Putative LRR receptor-like serine/threonine-protein kinase 708 915 - -
Pral5218g00018 973 CDD STKc_IRAK 638 905 - -
Pral5218g00018 973 ProSiteProfiles Protein kinase domain profile. 632 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5218g00018 Pral-Chr5218 128190 135552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5218g00018 9 962 Receptor kinase-like Gene Family AT1G53440 60.696 0.0 1159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5218g00018 PK_Tyr_Ser-Thr 7.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5218g00018 - - gmx:100817368 1311.21