Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5218g00016 ATGGAGTTTGCCATGTCAAGCTCCAAACCTCCCTCTGTTTTCTTCTTTGGATTTCTGCTTCTCAGTTTCTTCACAGATTTTCCATCAAATGCTCAACTCATACCCCAACAGGAAGTGAAGGCTTTACAGGCAATATCTGATAAGCTGACAAATGTGAAGTGGAAGGTGACACCAACATCTTGTATTAATGGAGATGGATTTGATAACCTCTTTGCTTCATCCTATGGAGTGACGAGGAATGTCACCTGCAGTTGCAATTTCCAGCACGGCACCGTTTGCCATGTCACCAATATCCTGTTGAAAAGCCAAAATATAGCAGGGGAGATACCCAGTGAATTTGGAAATCTCACCCATTTGACTGAACTTGATCTTTATCTCAACTATCTCAGTGGCCCAATTCCAACGTCTTTTAGGCATATCCCTCTCGTCACTCTGTCCCTTGCGGGGAATCGCATTAGCGGTTCAATTCCCGTTGAGTTGGGTGAAATTGCTAGTCTGAAGGATTTGAACCTAGAAGATAATCAGCTTGGAGGACCTCTTCCTCATAGTCTTGGAAAGTTGCCCACCTTACGGAGAATACGTCTTTCTGCAAATAATTTTACTGGAACAATACCAGAAACGTTTGGAAATCTGAAGAACATGATTGATTTTTCTATAGATGGGAGTACCTTATCAGGAAAGATACCAAGTTTGATTGGGAACTGGACCAAAATTCTCTCTATGGATATGGAGGGCACAGGCATGGAAGGCCCGATTCCTTCCACCATATCATTGTTGACAAATTTGAAAGAATTGAGAATATCTGACTTGAAAGGAACAACAACGATGACATTTCCTAATCTGAAGAATTTGATGAGTTTGGAACGACTGATATTAAGGAATTGCTTAATTACTGGCCCCATTCCAACGTATATTGGTGAAATGAAAAACTTAAAGACTTTGGACCTGAGTTTTAACAAGTTGACCGGTTCAATCCCTGACTTATTTCAGAACTTGAATTTTGATCAGATGTTTCTGACGAACAATTCTCTGAGTGGGGCAATACCAGAATGGGTCCTACAGAGCAAATATAAGATGGATTTATCTTACAACAATTTTACCGAGGCTTCTACATCTACTTGCCAGATCTTACAAGTGAACTTAGCTTCCAGTCTTTCATCTTCAACAAGAAATGCAACCTTTTGCTTGAGGAAGGGCCTACCTTGTCCAGGAAAACCTCAGTATCATTCATTGTTTATAAATTCTGGAGGACCCAAGATGGAGTTTCAGAAGAATGAATATGAAGAAGATATCAATCAAAATGGCGTTTCATACTTCTATATAAAAGATGACAAATGGGCTTACAGCAGCACAGGAACATATATATATGATGATAAAGCTGATTACGTAGCCAGTGTACAAACAAATAAGTTTTCTTTGAATGTTAATGGCTCAGAATACTACCAAACAGCACGTCTCAGCCCTCAATCACTTAAGTACTATGGCCTCTGTATGATGAAGGGTAATTATAAAGTAAGGCTCCATTTTGCTGAGATAATGTTTTCTGACGACCAGACATTTAACAGTCTTGGAACTCGCATATTTGATGTTTCAATTCAAGGTTTCAAATACTTGAAAGATTTTAACATTGCAAAGGAAGCTGGTGGAGCTGGTAAGGGCATCACAAGAGAATTCAATGTTGATGTGAATGATACCACCTTGGAGATCCATTTATATTGGGCAGGGAAAGGTACTACAGCAATTCCCCAAAGAGGTGTATATGGACCTCTAATATCTGCCATCACTGTGACCCCAAACTTCAAAGTTCCTGCAAAAGGATTGTCTGTCGGAGCTATTGTTGGAATTGTGGTTGGATCATGCGGCTTCCTTGTACTTGTACTCATTGTCCTCAGAAAGAAGGGTTTCCTTGGTGGGGAAGATCCAAAAGATAGAGAACTTTTAGATCTGAAGACCGGTTATTTTCCTCTAAGACAAATTAAAAATGCAACCAATGACTTTGACCCTGCAAATAAGATAGGAGAAGGTGGCTTTGGGCCTGTGTATAAGGGTGTGCTGTCTGATGGTGTTGCCGTTGCTATTAAGCAACTATCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTTAATGAAATAGGAATGATATCTGCTTTGCAACATCCAAATCTGGTGAAGCTTTACGGTTGTTGCATAGAAGGAAATCAATTGTTGCTTATATATGAATACATGGAGAACAATTGCCTTGCTCGAGCACTTTTTGGCTGTGATGAACAACGGATACACTTGGACTGGCCCACAAGAGTAAAGATTTTTCTTGGGATAGCAAGGGGATTGGCTTATCTTCATGAGGAGTCAAGGTTAAAAATAGTACACAGGGACATTAAGGCGACAAACATCTTACTTGATAAAGAACTAAATGCCAAAATCTCTGATTTTGGTTTAGCGAAGCTTGACGAAGGAGAAAATACCCACATCATCACCCGAGTAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGAGAGGTTACTTGACAGATAAAGCAGATGTTTATAGCTTCGGAGTTGTTGCTTTGGAAATTATTAGTGGAAAGAGCAACGCAAGTTACGTGCCAATGGATGACTTTGTTCATCTTCTTGATTGGGCCTATGTTCTCCAAGAGGAAGAAAAGCTTTTAGAGTTGGTGGATCCACGTCTTGGTTTAAACTACTCCCAAGATGAAGCCATGAGAATGCTAAATTTGGCTCTTTTGTGCACTAATCTATCTCCCACCCTCAGACCCTCCATGTCATCTGTAGTGAGCATGCTTGAGGGAAAAACTCCAATCCAAGCACCAATAAACAAGCATAGAGATCAATATGCAAGGTTCAAAATGCTGTCGTATGACAGCCAGACATTTGTAGCCTCTCAATCAAGTACGGAACAAAGAGGCAAGTCAACGGATGGGTCATGGGTTGACTCCCCAATATCTCTTCCGAGTAAGGATGATTTTTCTTCATCTAATAAGCTTCTTGAAGATTAA 3024 0.4024 MEFAMSSSKPPSVFFFGFLLLSFFTDFPSNAQLIPQQEVKALQAISDKLTNVKWKVTPTSCINGDGFDNLFASSYGVTRNVTCSCNFQHGTVCHVTNILLKSQNIAGEIPSEFGNLTHLTELDLYLNYLSGPIPTSFRHIPLVTLSLAGNRISGSIPVELGEIASLKDLNLEDNQLGGPLPHSLGKLPTLRRIRLSANNFTGTIPETFGNLKNMIDFSIDGSTLSGKIPSLIGNWTKILSMDMEGTGMEGPIPSTISLLTNLKELRISDLKGTTTMTFPNLKNLMSLERLILRNCLITGPIPTYIGEMKNLKTLDLSFNKLTGSIPDLFQNLNFDQMFLTNNSLSGAIPEWVLQSKYKMDLSYNNFTEASTSTCQILQVNLASSLSSSTRNATFCLRKGLPCPGKPQYHSLFINSGGPKMEFQKNEYEEDINQNGVSYFYIKDDKWAYSSTGTYIYDDKADYVASVQTNKFSLNVNGSEYYQTARLSPQSLKYYGLCMMKGNYKVRLHFAEIMFSDDQTFNSLGTRIFDVSIQGFKYLKDFNIAKEAGGAGKGITREFNVDVNDTTLEIHLYWAGKGTTAIPQRGVYGPLISAITVTPNFKVPAKGLSVGAIVGIVVGSCGFLVLVLIVLRKKGFLGGEDPKDRELLDLKTGYFPLRQIKNATNDFDPANKIGEGGFGPVYKGVLSDGVAVAIKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNCLARALFGCDEQRIHLDWPTRVKIFLGIARGLAYLHEESRLKIVHRDIKATNILLDKELNAKISDFGLAKLDEGENTHIITRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIISGKSNASYVPMDDFVHLLDWAYVLQEEEKLLELVDPRLGLNYSQDEAMRMLNLALLCTNLSPTLRPSMSSVVSMLEGKTPIQAPINKHRDQYARFKMLSYDSQTFVASQSSTEQRGKSTDGSWVDSPISLPSKDDFSSSNKLLED 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5218g00016 1007 Gene3D Ribonuclease Inhibitor 272 396 IPR032675 -
Pral5218g00016 1007 Gene3D - 409 599 - -
Pral5218g00016 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Pral5218g00016 1007 Gene3D Transferase(Phosphotransferase) domain 1 742 958 - -
Pral5218g00016 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase 742 949 - -
Pral5218g00016 1007 MobiDBLite consensus disorder prediction 969 1007 - -
Pral5218g00016 1007 CDD STKc_IRAK 672 939 - -
Pral5218g00016 1007 ProSiteProfiles Protein kinase domain profile. 666 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00016 1007 SMART LRR_typ_2 308 331 IPR003591 -
Pral5218g00016 1007 SMART LRR_typ_2 116 139 IPR003591 -
Pral5218g00016 1007 SMART LRR_typ_2 187 210 IPR003591 -
Pral5218g00016 1007 Pfam Malectin domain 411 594 IPR021720 -
Pral5218g00016 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 973 - -
Pral5218g00016 1007 SUPERFAMILY L domain-like 85 367 - -
Pral5218g00016 1007 Pfam Protein tyrosine and serine/threonine kinase 670 937 IPR001245 GO:0004672|GO:0006468
Pral5218g00016 1007 SUPERFAMILY Protein kinase-like (PK-like) 651 957 IPR011009 -
Pral5218g00016 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 599 - -
Pral5218g00016 1007 Gene3D Phosphorylase Kinase; domain 1 639 741 - -
Pral5218g00016 1007 MobiDBLite consensus disorder prediction 969 999 - -
Pral5218g00016 1007 SMART serkin_6 666 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00016 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 638 741 - -
Pral5218g00016 1007 ProSiteProfiles Leucine-rich repeat profile. 310 332 IPR001611 GO:0005515
Pral5218g00016 1007 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 203 - -
Pral5218g00016 1007 Gene3D Ribonuclease Inhibitor 34 271 IPR032675 -
Pral5218g00016 1007 Pfam Leucine Rich Repeat 310 332 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5218g00016 Pral-Chr5218 115627 135552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5218g00016 14 996 Receptor kinase-like Gene Family AT1G53440 60.277 0.0 1182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5218g00016 PK_Tyr_Ser-Thr 7.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5218g00016 - - gmx:100817368 1334.7