Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5218g00015 ATGAACATGAGGTTGGCTCTGTTCTTCTTCATCCTTTTGCTCCTCACAGTTTGGTCCACATCCTTTGCTTCTGCAACAAATTTACCAGACGATGAAGTGAAAGCGCTGAAAGATATAGCGGAGACGCTGGGGAAGAAGGATTGGGACTTCGGGGTAGATCCATGCAGCGGGGAAAATGGATGGATTACGCCTAATCCTGTTCATGGAGATGAAAATAACGTCACCTGCGTTTGCTCTTTTCTCAAAGTTGAAAATGCCACCGTCTGCCACGTCACCAACATACTCCTGAAAGGACAAAATCTTCAAGGCATGCTCCCTCCTGAACTGGTCAGGTTACCCTATCTTCAAGAAATTGATCTCTCTCGCAATTACCTGAACGGCACAATCCCTAAAGAATGGGGCTCCTTGAATCATCTTGTCAATATTTCCATAATTGGAAATCGACTAACGGGACCAATCCCAGCAGAGCTAGGAAATCTCACCAGTCTCGAAAGCATGGTTTTGCAGTTCAATCAGTTATCTGGAAATCTACCCCCGGAGCTTGGGAATCTTTCCCGGATTCGACGACTGTTTCTTACTTCCAACAATTTTTCTGGGGAATTACCTGCAACATTTGCAAGGCTCACTAGATTGATAGACTTTCGAATTGGTGGCAATCAATTTACTGGAAAGATACCCAGTTTTATTGGGAGCTGGACGAGTCTAGTGAAACTTGTGATCGAAGGGGGTGGTTTTAGTGGGCCAATTCCTACAGAAATCTCGTTTCTGCATAACATGACTGACTTGAGAATTAGTGACTTGAATGGACCTGATTCCACTTTTCCACAGCTTGCTAGGATGACAGGATTGAAGAGACTGGTATTAAGGAGTTGCAATATCACTGGAACATTACCTGAGTATCTTGGAAAAATGACCAGTATAAAATCCTTAGATCTCAGCTTTAACAAATTAACTGGACAAATTCCAAGCTCCTATGCTGGCTTAAGAAAAGCAGACTACATATATTTAACTGGAAACCTTCTCACTGGACCAGTGCCCGAGTGGGCAGATCGTTCTGGCTTTGTAGATCTTTCCTACAACAACTTCAGCGTTGGAAACCCAGGGCAGCCAGCATGTAAAACGGGCAATGTGAACCTGTTTTCAAGCACTTTGACAGGGAATGACTCGGGAGCAGTTCCATGTTTGAGCGGCTTTCGCTGTCCTAAAACATGGTACTCTCTACATATAAACTGTGGTGGCCGGCAATTAACAGTAAACGAAAGTACAATATTTGAAGAAGATTCAGATGGATCAGGATCAGCAAGATTTCACCGGAGTGACACAAACTGGATAATGAGCAGTACTGGTTACTTCATGGATAAAGAACGCGTAGATTACTACACCGTGCGGAGTGCATCAGCACTCTCTATAACCAATGCTGAATTATACATGAATGCACGTGTTTCTCCGCTCTCTCTGAGTTATTTTGCGTTTTGCATGGGAAACGGAAACTACACAGTAAAGCTCCATTTTGCTGAGATAATGTTCACAGCCGATAAAACATATAGCAGCCTCGGAAGGCGCGTCTTTGATGTCTATATTCAGGGAAAGCTGGTGCTGAAGGATTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGGCTGTCGTCAAAGAATTCACTGGTATTGTGACTAGGAATTCATTGGAGATCCGCCTATATTGGGCTGGGAAAGGGACAACTGCTATACCATATAAATCACTATATGGTCCGCTCATCTCTGCCATATCTGTGGATCCTGACTTTAAACCCCCATTGGAAAATGGAAGTAGCATATCTGGAGGGACAGTGGCTGGCATTGTGGTTGCGGGAGCAATGATTGTAATCCTGGTTTTCGGTATACTTTGGCGGAGAGGCAGTCTAGGACCCAAAAATTCACTGGAAAGAGAGCTAAGGAATTTAGATCTGCAAACTGGAATATTTACTTTAAGGCAAATTAAAGCAGCAACAAACAACTTTGACGTTGCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTCTACAAGGGCTTTCTGTCAGATGGTACTATAATAGCAGTTAAGCAGCTTTCGTCAAAATCAAAGCAAGGAAATCGGGAGTTTATAAATGAGATAGGCATGATTTCTGCTATGCAACATCCTTGTCTTGTCAAACTTTATGGCTGTTGTGTTGAGAGAGATCAATTATTGCTGGTATATGAATACATGGATAACAATAGTCTTGCTCGTGCCTTGTTTGGCCAAGAAGGTCAATTACATTTAGATTGGCCGACAAGATACAAGATTTGCATTGGTATTGCTAGAGGTTTGGCTTTCCTCCATGAAGAGTCAAGATTGAAGATCGTTCATAGAGACATTAAAGCCACCAATGTGCTGCTCGATAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCCAAACTTTATGAGGAGGACAATACCCATGTCAGCACCAGAATAGCTGGGACATATGGATATATGGCTCCTGAATATGCAATGCATGGTCATCTAAGTGACAAAGCAGATGTCTATAGTTTTGGTATTGTTGCATTGGAACTTGTTAGTGGGAAGAGCAACAACATGAACCACAGCATCCATCTTCTTGAGTGGGCACATTTCTTAAAGGAAAACTACAATCTAATGGAGATAGTTGATCCAAGGTTGAAATCAAAGTTTATAAAAGCAGAGGCTATGGTGATGATCAATGTAGCTTTTCTATGCACAAATGTGACTGCATCACTTAGGCCCAACATGTCCTCAGTGGTAAGCATGCTTGAAGAACGAACAGTTCGGGAGGTGGTTTCAGATGGAAGTGAGGCATTGGATGAGATGAAGAGGCGGAAGTATTACCAAAATATAGGGGAAAATAGCATATCAGTCGGGTCATCATCTATTGATTCACCTAAATCAGTTACAGATCTCTATCCTGTTCACTTGGATTCCTCTTACTGGATGAAAAGAAATTAG 2988 0.424 MNMRLALFFFILLLLTVWSTSFASATNLPDDEVKALKDIAETLGKKDWDFGVDPCSGENGWITPNPVHGDENNVTCVCSFLKVENATVCHVTNILLKGQNLQGMLPPELVRLPYLQEIDLSRNYLNGTIPKEWGSLNHLVNISIIGNRLTGPIPAELGNLTSLESMVLQFNQLSGNLPPELGNLSRIRRLFLTSNNFSGELPATFARLTRLIDFRIGGNQFTGKIPSFIGSWTSLVKLVIEGGGFSGPIPTEISFLHNMTDLRISDLNGPDSTFPQLARMTGLKRLVLRSCNITGTLPEYLGKMTSIKSLDLSFNKLTGQIPSSYAGLRKADYIYLTGNLLTGPVPEWADRSGFVDLSYNNFSVGNPGQPACKTGNVNLFSSTLTGNDSGAVPCLSGFRCPKTWYSLHINCGGRQLTVNESTIFEEDSDGSGSARFHRSDTNWIMSSTGYFMDKERVDYYTVRSASALSITNAELYMNARVSPLSLSYFAFCMGNGNYTVKLHFAEIMFTADKTYSSLGRRVFDVYIQGKLVLKDFNIAEEAGGVGKAVVKEFTGIVTRNSLEIRLYWAGKGTTAIPYKSLYGPLISAISVDPDFKPPLENGSSISGGTVAGIVVAGAMIVILVFGILWRRGSLGPKNSLERELRNLDLQTGIFTLRQIKAATNNFDVANKIGEGGFGPVYKGFLSDGTIIAVKQLSSKSKQGNREFINEIGMISAMQHPCLVKLYGCCVERDQLLLVYEYMDNNSLARALFGQEGQLHLDWPTRYKICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNTHVSTRIAGTYGYMAPEYAMHGHLSDKADVYSFGIVALELVSGKSNNMNHSIHLLEWAHFLKENYNLMEIVDPRLKSKFIKAEAMVMINVAFLCTNVTASLRPNMSSVVSMLEERTVREVVSDGSEALDEMKRRKYYQNIGENSISVGSSSIDSPKSVTDLYPVHLDSSYWMKRN 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5218g00015 995 Gene3D Phosphorylase Kinase; domain 1 636 741 - -
Pral5218g00015 995 Gene3D Ribonuclease Inhibitor 29 268 IPR032675 -
Pral5218g00015 995 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515
Pral5218g00015 995 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 958 - -
Pral5218g00015 995 Pfam Protein kinase domain 667 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00015 995 CDD STKc_IRAK 672 934 - -
Pral5218g00015 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Pral5218g00015 995 Gene3D - 404 593 - -
Pral5218g00015 995 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 741 - -
Pral5218g00015 995 Pfam Malectin domain 406 589 IPR021720 -
Pral5218g00015 995 FunFam Putative LRR receptor-like serine/threonine-protein kinase 742 943 - -
Pral5218g00015 995 Gene3D Transferase(Phosphotransferase) domain 1 742 954 - -
Pral5218g00015 995 SUPERFAMILY L domain-like 85 347 - -
Pral5218g00015 995 SUPERFAMILY Protein kinase-like (PK-like) 649 935 IPR011009 -
Pral5218g00015 995 Gene3D Ribonuclease Inhibitor 269 387 IPR032675 -
Pral5218g00015 995 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 594 - -
Pral5218g00015 995 SMART serkin_6 666 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00015 995 ProSiteProfiles Protein kinase domain profile. 666 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00015 995 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 29 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5218g00015 Pral-Chr5218 84986 94176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5218g00015 22 977 Receptor kinase-like Gene Family AT1G53420 55.590 0.0 1033
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5218g00015 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5218g00015 - - qsa:O6P43_001072 1309.66