Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5218g00014 ATGGATGGATCATGGGGAGCGAAAGATGAAGTCAAATGCAAAGTCTTGTTATATGCAATTTCGGACAAGCATGGCCATGAACCTCATTCTGCTGCCATTTTTCTTCGCAAGGATGGCTTTAGGCTCTCTTGTTCCAGAAGAAGCAATCTCCGAGAAGGGAGTCTTCAAGGAACTCTACCGCCGGAGCTAGTTAGGTTGCCGTACCTTCAAAAGCTGATCCTTGCACGCAACTACCTCAGCGGCACAATCCCTCTAGAATGGGGCTCTATGAAACTTGTTACAATCAACCTCCTTGCCAACCGTTTAACGGGTTCAATCCCAGCAGAGCTGGCAAACATATCCACTCTCGAGATTTTAAACATTGGTTTCAATCAATTTTCGGGAAATCTTCCTCCTGAGCTTGGGAAACTACCTCGGCTTCAAAGACTGCATCTTGCGTCAAACAATTTTACTGGGCAAATACCTGCAACATTCGCTGGGCTAACCAACTTGACTCACCTTCGACTCAGTGACAACAAATTCTTTGGAAAGATACCCGATTTGATTGGGAACTGGAAGAATCTCCGCAAACTAGCAATTGTGGGGAGTGGCTTGAGTGGGCCTATTCCGGCTGGACTTTCTCTTTTAGTGAACTTAGTTGATCTTTGTATTTGGTTATGCTTAAAATTTTTCTGCAGGAGAATTAGCAATTTAAATGGACCCCATTCAAATTTTCCACAACTTGATAATATGACAAATTTGGGAACAATCATATTGAGGAGCTGCAACATTGTTGGATCTTTACGACTTGACTTTACCGAGAGCATGTCTAATTTGATCGAGTTAGACCTTTCTTACAACAACTTCAGCATCAGCAACTTGAAGCCTTCACTTGGTACACAAAAGAACGTGAATTTATTCGCAAATCCTTTGGGAGGAAACAAGTCCGGACTCATCCCATGCTCCGGAAGGTGTCCTAAAACTTACTATTCGTTCCGCATAAATTGCGGCGGAAAGGAAGTATATGTTGGAGGGAAAAAATACGACGAAGACTCTATCGAGGGACGAGCATCTCAACTGTTCGTGAGTGAAACATCAAACTGGGCATTCAGTAACACTGGTCACTTCGTTGATGACGATCAACGTCCCATAAAATCTTACATTGCGGATAATGATAATAATAATTCAGGACTACTCTTTATGCCGAATCCTGAACTTTACACAAATGCACGCCTCTCCCCCGTTTCTCTGACTTACTATGGTTTTTGTCTGGAGAATGGTAACTACACAGTAAACCTTCATTTTGCTGAGATAATGTTTACTGCTGATAAAAGCTTCAGGAGCTTGGGAAGACGAGTATTTGATGTCTACATTCAGGGAAAATTGGTGCAGAAGGATTTCAATATTGCAGATGCAGCAGGAGCTGGTAAGGCAATCACAAGAAATCACACCGTTGTAGTTAACAAAAACGATTTGGAGATTCGCTTATATTGGGCTGGGAAAGGGACAACCAGTGTTCCTGATAGAGGGGTATATGGCCCTCTCATATCAGCAATTTCTGTGGATGCAGATTTTGCAATCCCATCGCAAAGTCGAGGTCGTCTACCTTTAGGCGTTGTTATTGCAATTGTGGTTGTGGGGACAATTACGATTGTCTTGGCTATGCTTTGCTGGATATGCTTTTCAAAGGAAAAAAGTACACCTGATCAAGAACTAGAAGTTTTGGACATGCGAACTGGTTCCTTTACCTTGCGGGAAATTATGGCAGCCACAAACAACTTCGACGATACCAATAAGATTGGAGAAGGAGGTTTTGGTCCTGTTTACAAGGGCTTCTTGTCAGATGGAACCGTGATAGCCGTCAAGCAGCTCTCTTCTAGATCACGTCAAGGGAATCGTGAGTTCTTAAATGAGATAGGGATGATTTCTGCTCTGCAGAACCCTCATCTTGTTAAGCTTTATGGATGCTGTGTTGAGGGAAGTCAACTACTTCTGATATACGAGTACATGGAAAACAATAGCCTTGCCCGTGCTTTATTTGGCCCAGAAAATTGCTGGCTAAAGCTGGATTGGTCCGCAAGAAAAAATATTTGCATTGGTATAGCCAAAGGTTTGGCTTTTCTGCATGAAGAATCAAGACTGAAAATTATTCATAGAGACATTAAGGCCACTAATATTCTACTTGATAAAGATCTTAATCCCAAGATTTCTGACTTCGGTTTGGCCAAGCTTTATGAAGAGGACAACACACACATTAGCACCAAAATTGCTGGAACTCGTGGTTATATGGCCCCTGAATACGTAATGCATGGATATTTGACCAAGAAAGCAGATGTTTATAGTTTTGGAATTGTAGTTCTAGAAATTATCGGCGGCAAAACCAATACCACTCAACTGTCAGAGGAAGAATGTTTTTATTTGCGCGATTGGGTAACCTTCATCTTATGCTCCATTACACTTTTTACTAGTGCTTCAATTAAACTTTGACCCTGACATCTAAGGCTGCCATTTATGTACTCTTGTTATCAGGCACATCATTTGAAAGAAGGAGGTAATCTGATGGATCTGGTGGATCCAAGGTTGGGTGAGGACTTCAACAGAGAGGAAATAATGGTTGTGATTGATGTGGCTGTCCGGTGCACTGAAAACTCTCCAAGACTGCGGCCTACCATGTCCAAAGTGCTTAACATTCTTGAAGGCAGGCCTTTTGTTGAAGAGGTAGTCTCAGATGATGAAAGTGAGATTATGGATGGTGACTTGAAATTGGATTGGACAAAGAAAGAAGAAGCTGATAAAGATGAAACCCAGGCAATAATTTCGCCAAGCCATAGGTTTCATACTACATATAAATCTTCTTCTCAAACGAAGGGTGTGTTTGGATTGACATTGGGTAAAAATGACTTTTAG 2886 0.4189 MDGSWGAKDEVKCKVLLYAISDKHGHEPHSAAIFLRKDGFRLSCSRRSNLREGSLQGTLPPELVRLPYLQKLILARNYLSGTIPLEWGSMKLVTINLLANRLTGSIPAELANISTLEILNIGFNQFSGNLPPELGKLPRLQRLHLASNNFTGQIPATFAGLTNLTHLRLSDNKFFGKIPDLIGNWKNLRKLAIVGSGLSGPIPAGLSLLVNLVDLCIWLCLKFFCRRISNLNGPHSNFPQLDNMTNLGTIILRSCNIVGSLRLDFTESMSNLIELDLSYNNFSISNLKPSLGTQKNVNLFANPLGGNKSGLIPCSGRCPKTYYSFRINCGGKEVYVGGKKYDEDSIEGRASQLFVSETSNWAFSNTGHFVDDDQRPIKSYIADNDNNNSGLLFMPNPELYTNARLSPVSLTYYGFCLENGNYTVNLHFAEIMFTADKSFRSLGRRVFDVYIQGKLVQKDFNIADAAGAGKAITRNHTVVVNKNDLEIRLYWAGKGTTSVPDRGVYGPLISAISVDADFAIPSQSRGRLPLGVVIAIVVVGTITIVLAMLCWICFSKEKSTPDQELEVLDMRTGSFTLREIMAATNNFDDTNKIGEGGFGPVYKGFLSDGTVIAVKQLSSRSRQGNREFLNEIGMISALQNPHLVKLYGCCVEGSQLLLIYEYMENNSLARALFGPENCWLKLDWSARKNICIGIAKGLAFLHEESRLKIIHRDIKATNILLDKDLNPKISDFGLAKLYEEDNTHISTKIAGTRGYMAPEYVMHGYLTKKADVYSFGIVVLEIIGGKTNTTQLSEEECFYLRDWVTFILCSITLFTSASIKLXPXHLRLPFMYSCYQAHHLKEGGNLMDLVDPRLGEDFNREEIMVVIDVAVRCTENSPRLRPTMSKVLNILEGRPFVEEVVSDDESEIMDGDLKLDWTKKEEADKDETQAIISPSHRFHTTYKSSSQTKGVFGLTLGKNDF 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5218g00014 961 ProSiteProfiles Protein kinase domain profile. 587 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00014 961 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 47 915 - -
Pral5218g00014 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Pral5218g00014 961 Gene3D Transferase(Phosphotransferase) domain 1 663 908 - -
Pral5218g00014 961 Gene3D Ribonuclease Inhibitor 38 157 IPR032675 -
Pral5218g00014 961 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 322 517 - -
Pral5218g00014 961 Gene3D Ribonuclease Inhibitor 158 313 IPR032675 -
Pral5218g00014 961 Gene3D - 321 517 - -
Pral5218g00014 961 Pfam Malectin domain 324 512 IPR021720 -
Pral5218g00014 961 FunFam Leucine-rich repeat receptor protein kinase EMS1 130 220 - -
Pral5218g00014 961 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Pral5218g00014 961 Pfam Protein kinase domain 588 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00014 961 SMART LRR_typ_2 137 160 IPR003591 -
Pral5218g00014 961 SMART LRR_typ_2 161 185 IPR003591 -
Pral5218g00014 961 SMART LRR_typ_2 269 294 IPR003591 -
Pral5218g00014 961 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 556 662 - -
Pral5218g00014 961 SUPERFAMILY L domain-like 49 296 - -
Pral5218g00014 961 Gene3D Phosphorylase Kinase; domain 1 551 662 - -
Pral5218g00014 961 SMART serkin_6 587 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5218g00014 961 SUPERFAMILY Protein kinase-like (PK-like) 567 892 IPR011009 -
Pral5218g00014 961 CDD STKc_IRAK 593 893 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5218g00014 Pral-Chr5218 68047 83550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5218g00014 49 898 Receptor kinase-like Gene Family AT1G53420 50.169 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5218g00014 Pkinase 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5218g00014 - - qsa:O6P43_001072 976.081