Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5218g00002 ATGCCTGGGAATAAGTATAACGGTAATCCAAATCATTTTCCAGGTCGTGTTGAACGACTTGTCCGAGAAAGAGAACTAAGAAAAATCACCAGGGCTTCTCATTTCAATGAGTCAGCTGATAATAATAATAGGGTTACTAAACCGTTTGAGCATAACCTGCGTTCAAGAGAAGATAATAACTCAGGAACTTCTAATGCGCAATACCTGGAGGCAACTGCAAGGGGTCTTTATCAGGGACGTGAAAGCCAAGATGGGAGGCCTTATAGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCAGCAGTTAGGAGAGGCGAAGATTCATGGTCTCTGGAGATTAGTGCTGGAGGTCTAGTTACCGCTCTTTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGGTGGGCTGGTGTCAACGTGCCAGACGAGATTGGACAGAAGGCACTTACTAAAGCTTTGGCTGAAAAGAGGTGCATTCCAGTGTTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGTTACTGCAATAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTACCCCAAGAAGATCGCCTTGCTACTACACGGAGCTTCCAGTCTCAGTTTGCAGCATACAAGAAAGCAAACCAAATGTTTGCTGATGTCGTGAACGAGCACTACGAAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTCATGTTTCTTCCAAAATGTTTAAAGGAATATAACAATAAAATGAAAGTTGGCTGGTTTCTTCACACGCCATTTCCATCTTCTGAAATTCATAGGACATTACCATCACGTTCAGAGCTCCTTCATTCTGTTCTTGCTGCTGATTTAGTAGGATTTCACACCTATGATTATGCCCGCCATTTTGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGCACTCCTGAAGGGGTTGAGGACCAGGGGAGATTGACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCTGATCGATTCAGACGTGCCCTTGAGCTTACTGAAGTGAAGAATGATATCAAAGAATTGGAAGAAAGATTTGAGGGTAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGGATTCCCCAGAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAGAATGCTTATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAGTGTATGCTCATGTTACTTTTCCTTTTGAGCCTTCTACAGTATAAAAGTTCACAAAATAGGCTTATCTTTTACAATATTGCTCATGTCCTATAA 1317 0.4229 MPGNKYNGNPNHFPGRVERLVRERELRKITRASHFNESADNNNRVTKPFEHNLRSREDNNSGTSNAQYLEATARGLYQGRESQDGRPYRLLVVANRLPVSAVRRGEDSWSLEISAGGLVTALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKEYNNKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFRRALELTEVKNDIKELEERFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPECMLMLLFLLSLLQYKSSQNRLIFYNIAHVL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5218g00002 438 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 81 335 - -
Pral5218g00002 438 Pfam Glycosyltransferase family 20 89 408 IPR001830 GO:0003824|GO:0005992
Pral5218g00002 438 MobiDBLite consensus disorder prediction 32 65 - -
Pral5218g00002 438 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 89 408 - -
Pral5218g00002 438 Gene3D Glycogen Phosphorylase B; 340 421 - -
Pral5218g00002 438 Gene3D Glycogen Phosphorylase B; 81 339 - -
Pral5218g00002 438 CDD GT20_TPS 89 408 IPR001830 GO:0003824|GO:0005992
Pral5218g00002 438 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 81 408 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5218g00002 Pral-Chr5218 544 4700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5218g00002 1 408 Trehalose Biosynthesis Gene Families AT1G78580 81.235 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5218g00002 K16055 - qsa:O6P43_029237 714.146