Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5216g00014 ATGGCGCGTGATGCTGATGGAGTTGGGTGTTCTTCAAGCTCTTTAGGTTCAACTAAGAGAAGGAAGTATGATGTGTTTTTGAGCTTTCGAGGGGAAGATACTCGGAAAAATTTTACTGATCATTTGTATGCTGCTTTAAAACGCAAAGGATTAAGAACTTTCCGGGATGAGGAAGAACTTGAAAGGGGAGAATCTATTAATCCAAGTTTATTACAAGGAATTGAAGAATCTCGTTCTGCAATTATTGTGTTCTCTCTAAATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTCAAAAGATCCTGCAGTTGAAGGAAGAGACAAGTCTTGAAGTATTTCCGATATTTTACGGTGTAGATCCATCTGATGTTAGGAAACAAAAGGGAAGTTTTGCAGAGGCATTCAGAAAGCATGAAGAAAGATTTGCACATGACAAAATGAAGGTGGAAAAATGGAGGGATGATTTAGAAAAAGTTGCTGCTATATGTGGTTGGGAGTTAAACGACGGGTATGAAGCAGAATTCATTGAAAGCTTTGTTGGAGAAATGGAGTCAAAGTTGCTTGATAAATCAGCATCTAGTCTTGGCAGGTTAATTGGAATTGAACCAAAATTAGATAAATTGGAGTCAATCGTGGAAAGTGAATCAAAAGGAGATGGGTTTATAGGAATATGGGGCACAGGAGGTGCAGGGAAAACAACTCTTGCTAGAGCCTTTTATGAGCGAAAGCGCAGAAACTTTAAGAATCATTGTTTTCTTCCTAATATTAGAGAGGCATGTGAAAAAGATCGTTTGATTTCATTGCAAAGAAAACTTCTTTTTTCTTTAGATAAAAGGAGTATGGAAGTGACTGATTCTTATGAAGGAATGGAGTTAATAAAAAGCAAGTTGACCAACAGAAAAATTCTACTTGTCCTTGATGATGTGAATCATATTGAGCAACTTGAAAATTTCACTCCAAGGCAAGGATGGTTCAGCAAAGGGAGCATAATAGTGATAACAACAAGGGATAAGCATTTGCTATCATCATATGGTGTATCTGATAGTGCTATATATGACATTGAATTCTTGACTGATAGTGAGTCCCGTGAACTTCTCATTCAAAATGACTTTAAAGAAGGGCAACCTGATGAAAATTTTTTGAAACTTGCTACAAACGTCATTGAATATGCTGGAGGCCTTCCTTTAGCAATCAAAGTGTTAGGTTCATTTCTTTGCAAAAGGAAGATAGAGGAATGGGAATATGCACTGGCTAAGTTCAAGAACTATCCTCCAGAGGACATTTCCAAGATACTTGAAGTGAGTCTTCACGGATTAGATGACCAGGAGAAAACCATATTCTTGGATATTGCTTGCTTTTTCAATGGGATGGATGAAGATCATATCATACACATTTTAGAAACGTTCGATAAGGATCTTCACACAAAAATTGGAATAAGGGTTCTTATTGAGAAATCACTAGTAATTAATTATGAAGGGCGTTTGTGGGTGCATGAAATTTTGCAAAATGTGGCTAAGCGTGTTGTCTATCAAGAATCACCTGGTGATGCCAGCAAGCGTTCTAGGATATTGTCCTTGGATGATGCCAATCATGTATTAGGAGGAAATAAGGTGACATTCCAAAGTTCTTGTGTTTGTGCACTCTTATAA 1650 0.3727 MARDADGVGCSSSSLGSTKRRKYDVFLSFRGEDTRKNFTDHLYAALKRKGLRTFRDEEELERGESINPSLLQGIEESRSAIIVFSLNYASSTWCLDELQKILQLKEETSLEVFPIFYGVDPSDVRKQKGSFAEAFRKHEERFAHDKMKVEKWRDDLEKVAAICGWELNDGYEAEFIESFVGEMESKLLDKSASSLGRLIGIEPKLDKLESIVESESKGDGFIGIWGTGGAGKTTLARAFYERKRRNFKNHCFLPNIREACEKDRLISLQRKLLFSLDKRSMEVTDSYEGMELIKSKLTNRKILLVLDDVNHIEQLENFTPRQGWFSKGSIIVITTRDKHLLSSYGVSDSAIYDIEFLTDSESRELLIQNDFKEGQPDENFLKLATNVIEYAGGLPLAIKVLGSFLCKRKIEEWEYALAKFKNYPPEDISKILEVSLHGLDDQEKTIFLDIACFFNGMDEDHIIHILETFDKDLHTKIGIRVLIEKSLVINYEGRLWVHEILQNVAKRVVYQESPGDASKRSRILSLDDANHVLGGNKVTFQSSCVCALL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5216g00014 549 PRINTS Disease resistance protein signature 391 405 - -
Pral5216g00014 549 PRINTS Disease resistance protein signature 296 310 - -
Pral5216g00014 549 PRINTS Disease resistance protein signature 221 236 - -
Pral5216g00014 549 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Pral5216g00014 549 Pfam TIR domain 22 213 IPR000157 GO:0007165
Pral5216g00014 549 Gene3D - 356 440 IPR042197 -
Pral5216g00014 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 450 IPR027417 -
Pral5216g00014 549 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 533 IPR044974 GO:0006952
Pral5216g00014 549 Gene3D - 189 351 IPR027417 -
Pral5216g00014 549 Pfam NB-ARC domain 210 432 IPR002182 GO:0043531
Pral5216g00014 549 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Pral5216g00014 549 Gene3D - 15 188 IPR035897 -
Pral5216g00014 549 SUPERFAMILY "Winged helix" DNA-binding domain 427 532 IPR036390 -
Pral5216g00014 549 SMART till_3 22 162 IPR000157 GO:0007165
Pral5216g00014 549 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 165 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5216g00014 Pral-Chr5216 175213 179651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5216g00014 199 523 WRKY Transcription Factor Family AT5G45050 33.028 3.62e-47 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5216g00014 - - pcin:129318967 667.537