Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5213g00003 ATGGCACCACAAGATACTGCTTCTGGTGTTGAAATACCGCAGAGAACTTCTGGTCTACTGCGGGATCAGGTTCAGCTAATAAAAAGAAAGGATTCTGATCGCTATGAAATTGTCTCCATCCCAGATTCTCTCTCATTTGAGAAAGGCTTCTTCATAGTTATTCGTGCATGCCAATTGCTGGCTCAAAAGAATGATGGGATAATATTAGTAGGAGTCGCTGGACCCTCTGGAGCTGGGAAGACTGTTTTCACTGAGAAGGTCCTCAGCTTCATGCCAAGCGTTGCTGTCATAACAATGGACGACTATAATGATTCTAGTCGAATCATAGATGGCAACTTTGATGACCCTCGGCTGACAGATTATGATACATTGCTCGAAAATATACGGGGTCTCAAAGCTGGCAAGCCAGTTCAGGTTCCAATATATGATTTCAAGTCTAGCTCTCGCATAGGCTACAGGACGGTTGAAGTCCCTAGCTCCCGTATCGTCATAATAGAAGGCATCTATGCCTTGAGTGAAAAGTTACGTCCTTTGCTGGATCTTCGGGTGTCTGTCACTGGAGGAGTACACTTCGACCTTGTCAAGCGGGTCTTGCGGGATATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCAACAAATTTCTGAAACGGTATACCCGATGTATAAAGCCTTTATTGAGCCAGATCTCCAAACAGCACATATTAAAATCATAAACAAGTTTAATCCATTCTCTGGATTCCAGAATCCCACCTACATATTGAAGTCAGCAAAGGCTGTGACAGAGGATCAAATCAAAGCCGTTATTGCTGCAGAGCATACTGAAACCAGGGAGGAAACGTATGACATATATCTTCTACCACCTGGGGAAGATCCTGAAGCATGTCAATCATACTTGAGGATGAGAAACCGGGATGGAAAGTACAATCTTATGTTTGAGGAATGGGTTACAGACAGTCCATTCATAATATCTCCTAGAATTACTTTTGAGGTTAGTGTACGCCTTCTGGGAGGGCTGATGGCCTTGGGGTACACAATTGCGGCTATCCTGAAAAGAAACAGCCATATCTTTCATGATGACAAAGTCTCCATAAAAACTGATTGGTTGGAACAACTAAATCGCCTATATGTTCAGGTGCAAGGGAGAGATAGAAACTATGTTAAATCTGTGGCTGAGAAGCTGGAGTTGGATGGTTCTTATGTTCCTCGCACCTACATTGAACAAATTCAGCTGGAGAAGCTTATAAATGATGTGATGGCATTGCCAGATGATCTGAAGACCAAACTCAGTCTAGACGATGATGTGGTTTTGAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGTACCTAAATCGCAATTTCTCCCACTCATTTTCAAGTCAAAGAGACAAGAGTCTATCTAAGTTGACTAGATTAGCTATAAATAACCGAAGATTTGATGGACGTGCTCTAGAATCACCTGCAGCAATCGCAAACCAAGGAGTCATTACACAACTTTCTGATCAAATTTCTACGTTAAATGAGAGAATGGATGAGTTCACATCCCGTATTGAAGAGCTGAATTCTAAATTTGCAAACAGAAAAGTATCCGCCAGTCAGCAGAACTTGGCTTTACAGGCTGAAGCTTGCAATGGCTCGGGACCCACTTCCCTCTTCCTTACTGGGTTGGGTAATGGTTCGTTGCTGCCTAATTCTTCATCATCTTCCCAACTGGCGAGGGAGTCCCCACTGATGGAAGAGGTTGTACTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGATAGTCTGAGCAATCTTTTGCATGAATATTGCGGAGAAAGAGCACGTCTAGGAAGGGTAAACCAAGCAAGTAGGATGCCTGATGTTGACTTCGCCATCCCGCTTTTTCTGACCGTGGCAATTGGAGCTGCTGGCGTCTTTTTGTTCAAGGGCTTTACATCCCATAAATAA 1974 0.4341 MAPQDTASGVEIPQRTSGLLRDQVQLIKRKDSDRYEIVSIPDSLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKVLSFMPSVAVITMDDYNDSSRIIDGNFDDPRLTDYDTLLENIRGLKAGKPVQVPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIQQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSAKAVTEDQIKAVIAAEHTETREETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRNSHIFHDDKVSIKTDWLEQLNRLYVQVQGRDRNYVKSVAEKLELDGSYVPRTYIEQIQLEKLINDVMALPDDLKTKLSLDDDVVLSPKEALSRASADRRMKYLNRNFSHSFSSQRDKSLSKLTRLAINNRRFDGRALESPAAIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFANRKVSASQQNLALQAEACNGSGPTSLFLTGLGNGSLLPNSSSSSQLARESPLMEEVVLIARGQRQIMHQLDSLSNLLHEYCGERARLGRVNQASRMPDVDFAIPLFLTVAIGAAGVFLFKGFTSHK 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5213g00003 657 Gene3D - 255 415 - -
Pral5213g00003 657 PANTHER URIDINE KINASE 18 425 - -
Pral5213g00003 657 Coils Coil 502 529 - -
Pral5213g00003 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 238 IPR027417 -
Pral5213g00003 657 CDD UMPK_like 69 241 - -
Pral5213g00003 657 PRINTS Uridine kinase signature 226 239 - -
Pral5213g00003 657 PRINTS Uridine kinase signature 134 149 - -
Pral5213g00003 657 PRINTS Uridine kinase signature 190 200 - -
Pral5213g00003 657 PRINTS Uridine kinase signature 67 84 - -
Pral5213g00003 657 Pfam Phosphoribulokinase / Uridine kinase family 70 238 IPR006083 GO:0005524|GO:0016301
Pral5213g00003 657 Pfam CYTH domain 271 406 IPR023577 -
Pral5213g00003 657 Gene3D - 68 248 IPR027417 -
Pral5213g00003 657 ProSiteProfiles CYTH domain profile. 250 412 IPR023577 -
Pral5213g00003 657 SUPERFAMILY CYTH-like phosphatases 264 409 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5213g00003 Pral-Chr5213 5988 11834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5213g00003 69 323 PRT Gene Family AT5G40870 23.864 5.41e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5213g00003 K00876 - gmx:100803122 1073.54