Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5213g00001 ATGGGGTGCTCGTTTTCCGGGTTGAATGCTCTCTACGACGCCGTTAATGGAGGAGGGGATGTCTGGATCAATGACAACCGATTCCGAATCGTCAGGCAGCTTGGGGAAGGTGGGTTCGCCTTCGTCTATTTGGTTAAGGAGGTGGTCGCTGACTCCTCTCCCGCCTCTGCTGGCAGTGGTCTCTCTAAGAAGCTCAAAGACTCCTCTCATGTCTCTGAGGATGGAACTTATGCTATGAAAAAGATCCTCATTCAGAATGGTGAACAGCTGGAGTTGGTGAGGGAGGAGATCCGTGTCTCATCGCTGTTTAGTCATCGAAATCTGCTCCCACTTCTTGATCATGCAATCATCTCTGTTAAGCCTACCCAAGAAACATCGTGGAACCATGAAGCATACTTGCTATTTCCGGTTCACTTGGATGGAACGTTGCTAGACAATGCCAAAACAATGAAAGCCAAGAAGGAGTTCTATTCTACCTCTGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTGGAGCATATGCATGGTCTAGATCCTCCATATGCACATAATGATGTCAAACCTGGAAATGTTCTGATAACGTATAGGAAAGGGCAGCCGCCTCTTGCCATATTGATGGATTTTGGCAGTGCTCGACCTGCCAAGAGGCAAATTCGCTCCCGACAAGAGGCATTACAGCTACAGGAATGGGCAGCTGAACACTGCTCTGCTCCTTTCCGCGCTCCTGAGCTGTGGGATTGCGCAAGCCATGCTGATATTGATGAAAGGACTGATTGGTCACTGGGATGCACATTGTATGCGATAATGTATGGCGTATCTCCATTTGAATACGCACTTGGAGAATCTGGAGGAAGCCTGCAATTGGCCATTGTAAATGCTCAGGTCAAATGGCCAGCTGGACCCAAGCCCCCATATCCAGAAGCTCTTCATCAGTTTGTGACATGGATGCTTCAACCTCAGGCCGCTGTGAGGCCCCGGATAAATGATATCATTATCCACGTTGATAAGCTGATTGCAAAGTTCTCTCCTTGA 1038 0.4827 MGCSFSGLNALYDAVNGGGDVWINDNRFRIVRQLGEGGFAFVYLVKEVVADSSPASAGSGLSKKLKDSSHVSEDGTYAMKKILIQNGEQLELVREEIRVSSLFSHRNLLPLLDHAIISVKPTQETSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFRQLCAGLEHMHGLDPPYAHNDVKPGNVLITYRKGQPPLAILMDFGSARPAKRQIRSRQEALQLQEWAAEHCSAPFRAPELWDCASHADIDERTDXWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGPKPPYPEALHQFVTWMLQPQAAVRPRINDIIIHVDKLIAKFSP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5213g00001 346 ProSiteProfiles Protein kinase domain profile. 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5213g00001 346 Pfam Protein kinase domain 58 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5213g00001 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 344 - -
Pral5213g00001 346 CDD STKc_16 27 342 - -
Pral5213g00001 346 Gene3D Transferase(Phosphotransferase) domain 1 16 345 - -
Pral5213g00001 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Pral5213g00001 346 SMART serkin_6 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5213g00001 346 SUPERFAMILY Protein kinase-like (PK-like) 20 336 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5213g00001 Pral-Chr5213 794 5336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5213g00001 33 336 EF-hand Containing Proteins AT4G04710 25.000 1.17e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Pral5213g00001 Pkinase 1.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5213g00001 K08856 - rcu:8264572 630.557