Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5212g00002 ATGGCTCCTACATTTGATTCAGTTCGTGCTATTAACCCATGCAGACAAAATTGGAAAATCAAAGTTCGTGTGGTTCGATTATGGACTATGCCCGGACGCTACTCTCATGAAGAGATATCATCCATGGAAATGATTCTCAGGGATGAGGATGGTGACAACATCCATGCTATAGTTAAGACTGCCTTCCTTCCACGACATCGCAAGAATTTTGAAGAGGGAAAAACATATGTGGTTTCATATTTTTATGTTTCTCCCAATACAGGCTCATACCGAACCACTAATCATCCCTACCGAGCAAACTTTATTTTTTCCACTTCTGTTCGACCATATGCGGATGATGGCAAAATAAACAACTTTGGTTTTGTATCCCATTCATTGTCTAAAATATTAGCCGATCAGTTTGATGATCGATATCTAATTGATGTCATCGGGTTACTAACTGGAGTGGGAGAAAAAGAAGAATGCAATGTCAATGGACACACACAGTTTAGGCTTGATGTAGAGTTACTGGATGAAGGGAAGGAAAAACTAGAATGTACACCGTGGGGAGATTTTACTAATGAAGTTCTGCAGCATGTGTCTCGTGTCCACACTGGAAGGAAAAAAGTCTCTAATTCCATGTACTCTTCCCCTCTCCTGATTCATCTTGCAATACAAGAAGTGCAAGAGTTTTTGCAAATATTGAAAAGTGTTGGGATTCAGTTGGGCCAAACACCTGCTCGAATTGCTCCACAAATTGTAGTATCTGTGGCCGACGATCTACTGGCTTTAGATGACCACAGAAAAATAGTGGATTTACGATTTGGACCAACAGAATCTATAGTGATTACTATGGCAGATATTGTAGATATGAGATCTAATCGTGGATGGATGTACACATCATGCAAACAGTGTAGCAAGAAAGTGGTTCCAGATGGAGAAGAATCTAAAGTTGCAATTGTAAACACTACCAATGTTGAGAAGGCAAACCCATTTGGTAATTTCTCATCAGCTGATTGTCAAGTTGAGGTAAAGAGTAGCAAGCACAATGCTTGTTTCGTGGAAATCCCTTCTACTACATCTGGACATAATGGTGCAAAGAACGGTACTGAAAATATGTTAAATCATCCACTTGGTGGAAATCTTGAAGCTGATGAAAATAATACATCATTTGCAAGACGCCGTAGAGCAAAACGTAAACAAATCTAG 1188 0.3956 MAPTFDSVRAINPCRQNWKIKVRVVRLWTMPGRYSHEEISSMEMILRDEDGDNIHAIVKTAFLPRHRKNFEEGKTYVVSYFYVSPNTGSYRTTNHPYRANFIFSTSVRPYADDGKINNFGFVSHSLSKILADQFDDRYLIDVIGLLTGVGEKEECNVNGHTQFRLDVELLDEGKEKLECTPWGDFTNEVLQHVSRVHTGRKKVSNSMYSSPLLIHLAIQEVQEFLQILKSVGIQLGQTPARIAPQIVVSVADDLLALDDHRKIVDLRFGPTESIVITMADIVDMRSNRGWMYTSCKQCSKKVVPDGEESKVAIVNTTNVEKANPFGNFSSADCQVEVKSSKHNACFVEIPSTTSGHNGAKNGTENMLNHPLGGNLEADENNTSFARRRRAKRKQI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5212g00002 395 Gene3D - 5 109 IPR012340 -
Pral5212g00002 395 SUPERFAMILY Nucleic acid-binding proteins 126 234 IPR012340 -
Pral5212g00002 395 CDD RPA1_DBD_A_like 19 107 - -
Pral5212g00002 395 Pfam Domain of unknown function DUF223 43 109 IPR003871 -
Pral5212g00002 395 Gene3D - 258 347 IPR012340 -
Pral5212g00002 395 MobiDBLite consensus disorder prediction 354 395 - -
Pral5212g00002 395 Gene3D - 116 234 IPR012340 -
Pral5212g00002 395 MobiDBLite consensus disorder prediction 354 368 - -
Pral5212g00002 395 SUPERFAMILY Nucleic acid-binding proteins 4 114 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5212g00002 Pral-Chr5212 19988 22009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5212g00002 3 307 Core DNA Replication Machinery Family AT5G45400 22.419 1.42e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5212g00002 - - pcin:129299041 244.202