Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5211g00004 ATGCTCTGCAATCGGTTATCAACGGTTTCAGGAAGTGATTCTCGCTTCTTCTACCTCCCAAATCCACCAATTTCTTCCCCCAAATCCTTCAAATTTTCCTCCATTCGACTTCCGTCTCGTTCCGCTTCATTCCAACTGAAAGTCGCGTGTGTCGCCGAGCCTTTATCTTCCGCCGACGAATTGAGCTTCTACGAGCTTCTCGGTATCCCAAAAACCGGATCCTTACCCGACATCAAGCAAGCCTACAAGCAGCTCGCTCGCAAGTACCACCCGGATGTGTCGCCGCCGGGTCGGGTCGACGACCACACCAAGATGTTCGTTCGAATCCATGAAGCCTATGAGACCTTGTCGGATCCTTCACGGAGAGCTCTGTACGACAGTTCCATGGGGCTTCACTCAGGCGGAAGCTACTACGACCATGCGATGGCTGAACGGAAGAAAGAATGGAGATCTCAATGGCAGGCTCAGCTCGCACAGCTGCAGAACAGAACTACTAATAAGAGGCATGGCGATAGAAGTCAGTTATGGGCGGCTCGAGTCCGCCGGCAGAGGAGTGGATCCTTTAATGAAGCTTACAATTAG 582 0.5189 MLCNRLSTVSGSDSRFFYLPNPPISSPKSFKFSSIRLPSRSASFQLKVACVAEPLSSADELSFYELLGIPKTGSLPDIKQAYKQLARKYHPDVSPPGRVDDHTKMFVRIHEAYETLSDPSRRALYDSSMGLHSGGSYYDHAMAERKKEWRSQWQAQLAQLQNRTTNKRHGDRSQLWAARVRRQRSGSFNEAYN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5211g00004 193 ProSitePatterns Nt-dnaJ domain signature. 106 125 IPR018253 -
Pral5211g00004 193 ProSiteProfiles dnaJ domain profile. 62 129 IPR001623 -
Pral5211g00004 193 Pfam DnaJ domain 63 126 IPR001623 -
Pral5211g00004 193 CDD DnaJ 63 118 IPR001623 -
Pral5211g00004 193 SUPERFAMILY Chaperone J-domain 58 132 IPR036869 -
Pral5211g00004 193 SMART dnaj_3 61 121 IPR001623 -
Pral5211g00004 193 PRINTS DnaJ domain signature 82 97 IPR001623 -
Pral5211g00004 193 PRINTS DnaJ domain signature 101 121 IPR001623 -
Pral5211g00004 193 PRINTS DnaJ domain signature 64 82 IPR001623 -
Pral5211g00004 193 Gene3D DnaJ domain 51 164 IPR036869 -
Pral5211g00004 193 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 32 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5211g00004 Pral-Chr5211 91755 93523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5211g00004 64 127 C2H2 Transcription Factor Family AT1G74250 43.284 5.76e-08 50.1