Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5206g00009 ATGAGTGCTCAGTCGCCGGAAGACGATAGAAACCAGGAAGAGAGCCGTCTACTAGAGCCCCAAAATGAGTCTCAGCCATCTTCATTGGACGGCCAAGAGGTCGCATATGAAGCAGGGGAGAAGATCCTTGTCTTCAATCTAGACTCCTTTGACGAGGATTCAGCGACCGGGCCGTCTTTCTCGTGGAAAAAACTGTGGCTATTCACTGGTCCTGGATTCTTGATGAGCATAGCTTTTCTGGATCCAGGAAATCTCGAAGGGGATCTACAAGCTGGGGCCATTGCCGGCTACTCCCTGCTCTGGCTACTAATGTGGGCCACTATTATGGGTTTACTTATACAGCTTTTATCAGCCAGGATTGGGGTGGCTACGGGTCGGGACCTGGCAGAATTGTGCAAGGAGGAATATCCCAAATGGGCTCGGCTGGTGCTCTGGCTCATGGCGGAGATTGCCTTGATTGGTGCTGATATTCAGGAGGTCATTGGCAGTGCAATCGCCATCCAAATTCTTAGCCACGGCGTATTGCCGCTCTGGGCCGGAGTCTTAATTACTGCTTCGGATTGTTTCATCCTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTAATTGCAACTATGGCTCTTTCTTTTGCCTGGATGTTTGGTGACACAAAACCCAGTGGACACGAACTTTTGATGGGTATTTTGGTTCCGAGACTTAGCTCCAAGACAATTCGCCAAGCTGTAGGGGTTGTGGGTTGTGTCATAATGCCTCACAATGTATTCCTTCATTCTGCTTTGGTTCAATCGAGGAAGATTGATCCCTTGAATAAAGGCCGAGTGCAGGAGGCTCTCAAGTATTATTCCATTGAGTCATCCGCTGCACTTTTAGTCTCTTTCATTATCAATCTATTTGTCACTACGGTTTTTGCTAAGGGGTTTTATGGTACAAAGCAGGCCAATAGCATAGGATTGGTAAATTCTGGGCAGTATCTTCAGGAAAAGTATGGAGGAGGACTCTTCCCCATTCTTTATATATGGGGTATTGGGTTATTGGCAGCTGGGCAAAGTAGTACAATCACCGGTACTTATGCTGGGCAATTCATCATGGGGGGATTTCTCGACCTTCGTTTAAAGAAATGGTTGAGGGCATTGATCACTAGAAGTTTTGCAATTGTGCCAACCATAGTCGTAGCTATTGTTTTCAATACCTCAGAGGCCTCATTGGACATTTTGAATGAATGGCTTAATGTGCTTCAGTCTATGCAAATTCCATTTGCACTCATACCTCTCCTCACCTTGGTTTCCAAAGAGCAGGTCATGGGAACCTTTAGGGTCGGGCCTACTCTGAAGAGGGCGGCATGGACGGTTGCTGTGCTGATAATTGTGATTAATGGGTATCTTTTGTTAGATTTTTTCCTTTCTGAGGTGAAAAGCTTGCTGCTTGGTTTTGCAGTTTGCTCCTGTACAGTTGCATATGTATTATTCATTGTATATTTGGTTTCACGGAGTGGTGCTCTTCCTTCATGTCGGGGTAGTATACTTCCCAAGGGTCTTCTCTGTTCAGAGAATTGA 1575 0.4597 MSAQSPEDDRNQEESRLLEPQNESQPSSLDGQEVAYEAGEKILVFNLDSFDEDSATGPSFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATIMGLLIQLLSARIGVATGRDLAELCKEEYPKWARLVLWLMAEIALIGADIQEVIGSAIAIQILSHGVLPLWAGVLITASDCFILLFLENYGVRKLEAAFAVLIATMALSFAWMFGDTKPSGHELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPLNKGRVQEALKYYSIESSAALLVSFIINLFVTTVFAKGFYGTKQANSIGLVNSGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLDLRLKKWLRALITRSFAIVPTIVVAIVFNTSEASLDILNEWLNVLQSMQIPFALIPLLTLVSKEQVMGTFRVGPTLKRAAWTVAVLIIVINGYLLLDFFLSEVKSLLLGFAVCSCTVAYVLFIVYLVSRSGALPSCRGSILPKGLLCSEN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5206g00009 524 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 63 441 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 MobiDBLite consensus disorder prediction 1 31 - -
Pral5206g00009 524 Hamap Divalent metal cation transporter MntH [mntH]. 52 473 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 49 502 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 NCBIfam Nramp family divalent metal transporter 70 439 - -
Pral5206g00009 524 Pfam Natural resistance-associated macrophage protein 86 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 PRINTS Natural resistance-associated macrophage protein signature 199 220 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 PRINTS Natural resistance-associated macrophage protein signature 417 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 PRINTS Natural resistance-associated macrophage protein signature 144 170 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 PRINTS Natural resistance-associated macrophage protein signature 355 374 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 PRINTS Natural resistance-associated macrophage protein signature 383 400 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 PRINTS Natural resistance-associated macrophage protein signature 174 193 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5206g00009 524 PRINTS Natural resistance-associated macrophage protein signature 248 271 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5206g00009 Pral-Chr5206 38031 42338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5206g00009 33 505 Inorganic Solute Cotransporters AT1G47240 80.632 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5206g00009 K21398 - qsa:O6P43_016014 862.448