Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5206g00006 ATGGAGACTCGCGCCGCAAAGAGAAGAGCAGAGGCCGCCGCCTTAGCCCAGAACCGATCACCTAAAAGAAAGCGAGTGGTCTTGGGGGAACTTCCTAACTTATCCAACCTTGTTGATCCTGTGAATTCGAATCCGGGGTTGGAGCCACAGAAACCGAAATATCGAAGGAATACGAGGGCCAAGAAAGCCGCGACGACGAAGAGCAGCTTCTCTTCGGGGGATCCCAAGTCGGACGTCGTACAGGCAGTTCGCACTGATGCCAAGTCAGGCACCGATGCGAATTTGGATGATTTGCAAAATAGCGAGCCTTATATTTCGGACATTTATCAGTACCTTCGCAAAATGGAGATGGAGCCAAAGAGAAGACCAAGGCCTGATTACCTAGAGAAAGTTCAGAAAGATGTCACCGCCAACATGAGGGGAATACTGGTCGATTGGCTAGTAGAAGTTGCAGAGGAGTACAAGCTTCTCTCTGACACTCTTTACCTCTCTGTTTCCTACATTGATCGCTTCCTCTCTACCAACCAAGTCACAAGACAGAGGCTTCAGTTGCTGGGTGTTGCATCGATGTTCATTGCATCGAAGTACGAAGAAATCAGCCCTCCGCATGTAGAAGAGTTTTGCTACATCACCGATAATACATACAGGAAGGCAGAGGTTGTTGAAATGGAGGCTGCTATACTCAAGTCTCTAAATTTTGAGATGGGTAGCCCCACTGTGAAGACGTTTCTAAGGAAATTTACTGGCATTACATCCGAAAATCAGAAAACCCCAAATCTGCTGTTTGAGTTCCTTTGCTGCTATCTGGCCGAGCTAAGTTTGTTGGATTACAACTGTATTAAATTTTTACCTTCTATGGTGGCTGCTTCAGTCGTATTTCTGGCCAACTTCACCATCCGGCCTAAGGTGCATCCCTGGAATTCATCCCTGCAAGAATGCTCGGGATATAAACCAGCTGAGTTGAATGATTGTGTGCTTATCTTACACGACTTGTACTTGGCAAGAAGGGGAGGATCTTTGCAAGCTATACGGGAGAAATACAAACAGCACAAGTTTAAATACGTGGCGATGCTGCCATCTTCTCCGGAGATACCAATTTCTTACTTTGAAGAAGTATAA 1119 0.4629 METRAAKRRAEAAALAQNRSPKRKRVVLGELPNLSNLVDPVNSNPGLEPQKPKYRRNTRAKKAATTKSSFSSGDPKSDVVQAVRTDAKSGTDANLDDLQNSEPYISDIYQYLRKMEMEPKRRPRPDYLEKVQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLSVSYIDRFLSTNQVTRQRLQLLGVASMFIASKYEEISPPHVEEFCYITDNTYRKAEVVEMEAAILKSLNFEMGSPTVKTFLRKFTGITSENQKTPNLLFEFLCCYLAELSLLDYNCIKFLPSMVAASVVFLANFTIRPKVHPWNSSLQECSGYKPAELNDCVLILHDLYLARRGGSLQAIREKYKQHKFKYVAMLPSSPEIPISYFEEV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5206g00006 372 Pfam Cyclin, N-terminal domain 107 235 IPR006671 -
Pral5206g00006 372 MobiDBLite consensus disorder prediction 63 78 - -
Pral5206g00006 372 FunFam Cyclin A1 225 357 - -
Pral5206g00006 372 Pfam Cyclin, C-terminal domain 238 360 IPR004367 -
Pral5206g00006 372 PIRSF Cyclin_A_B_D_E 1 367 IPR046965 GO:0016538|GO:0044772
Pral5206g00006 372 ProSitePatterns Cyclins signature. 140 171 IPR006671 -
Pral5206g00006 372 FunFam Mitotic cyclin 6 123 223 - -
Pral5206g00006 372 Gene3D - 123 236 - -
Pral5206g00006 372 PANTHER CYCLINS 78 349 IPR039361 -
Pral5206g00006 372 SMART cyclin_7 242 330 IPR013763 -
Pral5206g00006 372 SMART cyclin_7 145 229 IPR013763 -
Pral5206g00006 372 SUPERFAMILY Cyclin-like 96 235 IPR036915 -
Pral5206g00006 372 Gene3D - 107 357 - -
Pral5206g00006 372 SMART Cyclin_C_2 238 361 IPR004367 -
Pral5206g00006 372 MobiDBLite consensus disorder prediction 1 97 - -
Pral5206g00006 372 SUPERFAMILY Cyclin-like 238 361 IPR036915 -
Pral5206g00006 372 CDD CYCLIN_AtCycA-like_rpt2 238 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5206g00006 Pral-Chr5206 27670 30144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5206g00006 5 372 Core Cell Cycle Gene Families AT1G47210 57.065 3.07e-151 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5206g00006 K06627 - qsa:O6P43_016015 480.715