Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5206g00005 ATGTCCGATCAAGAGAATCGCGGGAGGGCCACTCGAGCAGCCAAGAAAAGGGCCGCCGCCGCCATTGCTGAACTGCATGTTGCCACCAAGAGGCGCGTGGTGTTGGGAGAGCTGACCAACTTGTCGAATGTTGTTGTGCTAGAGAAACCATGCCCTGGGGAAGAGATTCAGAGGGAGAAAAGTAGCAGAATCAAGAGAAAACTCAGGAAAGTGCTCCCCACAACCGCGGCGCCGCCGTCCAACCTCAATGACGCTGATGACCCTCAATTGGCTGCGCCTTATGTTTCTGATATTTACGAGTATCTCCGAAAATTGGAGGCGAATCCCAGAAGAAGACCGTTACCTGATTACATAAAAAAAGTTCAGAGAGATATTAATCCTAATATGAGGGGTGTTCTGGTAGATTGGTTGGTGGAAGTTGCAGAGGAATACAAGCTTGTTTCAGACACTCTTTATCTCACCGTTGCTTATATCGACAAATATCTCTCTATAAATGCTCTTAGTAGGCACAAGCTGCAGTTACTGGGTGTTTCTTCGATGCTAATCGCCTCGAAATATGAGGAGATCAAGCCTCCTGAGGTGGAAGAGTTTTGTTATATTACAGACAACACATACACCAAGGAAGAGGTTGTGACCATGGAGGCTGAAATACTCAAGTCATTGAAATATGAAATGGGATATCCTACAGTAAAGACATTTCTAAGAAGATTCTGTAGATTTGCTCTGGAGAATTATGAGGCTTCTGAACTCCAGTTTGAATTCCTCACTTACTACCTTGCGGAGCTCAGTTTGTTGGATTATGGTTGTGTAAAGTTCTTGCCTTCTTTGGTGGCCGCCTCTGTTGTATTTCTTGCTAGGTTTATGTTAAGCCCAAAGACTCATCCTTGGAATTCCACGCTCCATCTACACTCAGGGTATAAATCATCTGACTTGAAGGACTGCGCATTGGTCATTCATGACTTGTATCTCAGTAGGAGATGCGGGTCTTTGCTAGCTGTAAGAGATAAATATAAACAGCATAAGTTCAAATGTGTTGCAACAACACCTTCTCCTCCAGAGATACCTCTTTCTTATTTTGAAGTTACAGAGACAGATCACTAG 1101 0.4432 MSDQENRGRATRAAKKRAAAAIAELHVATKRRVVLGELTNLSNVVVLEKPCPGEEIQREKSSRIKRKLRKVLPTTAAPPSNLNDADDPQLAAPYVSDIYEYLRKLEANPRRRPLPDYIKKVQRDINPNMRGVLVDWLVEVAEEYKLVSDTLYLTVAYIDKYLSINALSRHKLQLLGVSSMLIASKYEEIKPPEVEEFCYITDNTYTKEEVVTMEAEILKSLKYEMGYPTVKTFLRRFCRFALENYEASELQFEFLTYYLAELSLLDYGCVKFLPSLVAASVVFLARFMLSPKTHPWNSTLHLHSGYKSSDLKDCALVIHDLYLSRRCGSLLAVRDKYKQHKFKCVATTPSPPEIPLSYFEVTETDH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5206g00005 366 SUPERFAMILY Cyclin-like 227 353 IPR036915 -
Pral5206g00005 366 FunFam Mitotic cyclin 6 113 213 - -
Pral5206g00005 366 Gene3D - 97 347 - -
Pral5206g00005 366 CDD CYCLIN_AtCycA-like_rpt2 228 342 - -
Pral5206g00005 366 SUPERFAMILY Cyclin-like 86 225 IPR036915 -
Pral5206g00005 366 SMART cyclin_7 232 320 IPR013763 -
Pral5206g00005 366 SMART cyclin_7 135 219 IPR013763 -
Pral5206g00005 366 ProSitePatterns Cyclins signature. 130 161 IPR006671 -
Pral5206g00005 366 Pfam Cyclin, N-terminal domain 97 225 IPR006671 -
Pral5206g00005 366 PANTHER CYCLINS 69 345 IPR039361 -
Pral5206g00005 366 SMART Cyclin_C_2 228 351 IPR004367 -
Pral5206g00005 366 FunFam Cyclin A1 215 347 - -
Pral5206g00005 366 Pfam Cyclin, C-terminal domain 228 350 IPR004367 -
Pral5206g00005 366 Gene3D - 111 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5206g00005 Pral-Chr5206 22430 25402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5206g00005 1 360 Core Cell Cycle Gene Families AT1G47230 58.516 1.29e-153 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5206g00005 K06627 - cave:132183787 481.485