Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5204g00004 ATGAGAAGCAGGGCGGAGAAGCGCAAGCAAGATGAATCAAGACAGAAACCGTACAGAGGGATTAGGATGAGGAAGTGGGGCAAGTGGGTGGCGGAGATTAGGGAACCCAACAAGAGGTCGAGGCTATGGTTGGGGTCATACACCACCCCGGTGGCCGCCGCTCGCGCTTACGACACCGCCGTTTTCTATCTCAGAGGCCCTTCGGCTCGCCTCAACTTCCCCGAATTGTTATTCCAAGACGACGGCGACGACCACCGCCTCGTCGTCCAGGGCCACATGTCCCCCGATTCCATTCGCAAAAGGGCCACCGAAGTCGGCGCCAGAGTTGACGCTCTCCAAGCCGCTCTTCATCACCCAAATTCTCGTATCCCAAACCCTTCCGACGACAAGCCCGACTTGAATGAGTTCCCCAGACCAGAAGATCTTGTTGAGGATTACAATTAG 444 0.5631 MRSRAEKRKQDESRQKPYRGIRMRKWGKWVAEIREPNKRSRLWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQDDGDDHRLVVQGHMSPDSIRKRATEVGARVDALQAALHHPNSRIPNPSDDKPDLNEFPRPEDLVEDYN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5204g00004 147 CDD AP2 18 76 IPR001471 GO:0003700|GO:0006355
Pral5204g00004 147 Pfam AP2 domain 18 66 IPR001471 GO:0003700|GO:0006355
Pral5204g00004 147 Gene3D AP2/ERF domain 16 75 IPR036955 GO:0003700|GO:0006355
Pral5204g00004 147 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Pral5204g00004 147 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Pral5204g00004 147 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Pral5204g00004 147 MobiDBLite consensus disorder prediction 123 147 - -
Pral5204g00004 147 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Pral5204g00004 147 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Pral5204g00004 147 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 4 142 - -
Pral5204g00004 147 FunFam Ethylene-responsive transcription factor 2 16 75 - -
Pral5204g00004 147 MobiDBLite consensus disorder prediction 115 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5204g00004 Pral-Chr5204 35202 36204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5204g00004 14 145 AP2-EREBP Transcription Factor Family AT3G50260 58.156 5.42e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5204g00004 AP2 3.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5204g00004 K09286 - cave:132183872 200.675