Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5202g00004 ATGTCAACCAAGGGCGAACACCATACGGTCCCCCTTTCGGTGCTCCTGAAGCGTGAATCAGCAAGCGAGAAAATTGAAAAACCAGAAATTCACCATGGTCAAGCAAGCCAGAGCAAAAAGGGAGAGGACTTCACGCTACTAAAAACGGAATGCCAGAGGGTGGTGGGGGACGGGGTGTCGACATATTCTGTTTTCGCGCTATTTGATGGACACAAAGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTACTAAATAATATTTTAAGTGTGATTCCTTCGGATCTTAACAGAGATGAGTGGATAGCAGCTTTGCCTAGGGCGTTAGTTGCGGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGACAGCTCAAACATCAGGAACAACTGTGACATTTGTGATTATAGAAGGTTGGATTGTCACAGTTGCATCTGTTGGTGATTCCCGATGCATACTTGAACCTTCTGAAGGTGGGCTTTATTACCTATCAGCGGATCATAGGCTAGACACCAATGAAGAGGAGGTGGCACGTATAACGAGCAGTGGAGGTGAGGTTGGTCGGCTCAATACTGGTGGAGGTGCAGAGATTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCCAGATCTATTGGTGATATGGATGTTGGACAATTCATTGTTCCTGTACCTTACGTTAAGCAAGTGAAGCTGTCCACATCTGGAGGCAGACTTATTATCTGCAGTGATGGTGTTTGGGATGCTCTATCTGCAGAAACAGCCCTTGATTGTTGTCGTGGGATGCCACCAGAAGTTGCAGCACCGCATATAGTTAAAGAGGCGGTACAAGCAAAGGGGCTTAGAGATGACACAACCTGCGTTGTTATTGATATTCTGCCCCAAGAGAAACCACCTGCTCCTCCTTTGACACAAGTTAAAAGACCAATGAAAGGAATGTTTAAATCCATGTTTCGGAGAAAATCTGCGGAATCATCTTCTTATAATGAGAAAGATTATATGGAGCCTGATGTGGTAATGGAGATGTACGAGGAAGGATCTGCTATGCTTTCAGAAAGGTTAGATACGAAATATCCACTCTGCAACATGTTCAAGTTGTTTACCTGTGCAGTCTGTCAAGTTGAGATGAAGCCTGGGGAGGGTATATCAGTACACGAAGGGGCATCCAACCTGGGGAAATTGCGTCCCTGGGACGGTCCATTCCTTTGCCGAAGTTGCCAAGACAAGAAAGAAGCCATGGAAGGGAAGAGAAAATTAGATAGACGTGGCAGCGGGAGTGACTAA 1287 0.4553 MSTKGEHHTVPLSVLLKRESASEKIEKPEIHHGQASQSKKGEDFTLLKTECQRVVGDGVSTYSVFALFDGHKGSAAAIYAKENLLNNILSVIPSDLNRDEWIAALPRALVAGFVKTDKDFQETAQTSGTTVTFVIIEGWIVTVASVGDSRCILEPSEGGLYYLSADHRLDTNEEEVARITSSGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGQFIVPVPYVKQVKLSTSGGRLIICSDGVWDALSAETALDCCRGMPPEVAAPHIVKEAVQAKGLRDDTTCVVIDILPQEKPPAPPLTQVKRPMKGMFKSMFRRKSAESSSYNEKDYMEPDVVMEMYEEGSAMLSERLDTKYPLCNMFKLFTCAVCQVEMKPGEGISVHEGASNLGKLRPWDGPFLCRSCQDKKEAMEGKRKLDRRGSGSD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5202g00004 428 Pfam Protein phosphatase 2C 53 273 IPR001932 -
Pral5202g00004 428 PANTHER PROTEIN PHOSPHATASE 24 292 IPR015655 GO:0004722|GO:0006470
Pral5202g00004 428 Gene3D - 31 299 IPR036457 -
Pral5202g00004 428 FunFam probable protein phosphatase 2C 12 32 299 - -
Pral5202g00004 428 SMART PP2C_SIG_2 46 293 IPR001932 -
Pral5202g00004 428 CDD PP2Cc 39 293 IPR001932 -
Pral5202g00004 428 SMART PP2C_4 21 291 IPR001932 -
Pral5202g00004 428 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Pral5202g00004 428 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5202g00004 Pral-Chr5202 19974 24640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5202g00004 1 428 PP2C-type Phosphatase Gene Family AT1G47380 79.167 0.0 716