Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral51g00018 ATGGCGAAGCGACACCGTTCTATATTCGAACTCCAGCCTGAATTTTTTCACTCCTGTCGCCTCCTTGCTTCCCCTCGATTGTCCGCTTCCGACAATCTTCAGAATTGCTACAACTCAGTTCACGAAACCGTTGACCCTATTGAGAAGGACGCTGATGGCTTCCAAGACGTCGTTTTTTCAGTGCCCAGATGGACTTGCAATACTTGCAAGGCTCAATTTGACTCCCTTCAAGACCAGCGTTTGCATTTCAAATCGGATGTTCATCGTTTCAATGTGAAGTTGACAATGGCTGGAAAGAGTATTGTTAAGGAAGAAGATTTTGGGCTGTTGACATCTGATTCTATTAAAGACTATGATGTTTCGAGTATATCAGGATCAGAAGATGATGATGATGGTGATGATGATATTGAAACTCGGAGACAAAATGTTCGTGACAAATTAAGTGAAAGTTTTAGGCAGAAGTTAATTATCTGCCTTCCGACAGGGGAAAGAGTTTCTATTTGGAAGTGCTTAGTAATGAACATGGGTGACAATATACTGAATGAGAACGAAGTGATTGAGAGGTTGAAGTCCTTGACTCTTGAGCCCAGGAATAAATCTCGCTTGAGAATTGTGCTGCTTGCATCTGGTGGGCACTTTGCAGGTTGTGTGTTTGATGGTGATGAGCTTGTGGCTCACAAGACATTCCACAGATATGTTGTGAGGGCTAAGGCAGGGAAAAAACAGTCAACAAAAGATGCTACTGGTAGGGCTGCCCATTCTGCAGGGGCTTCACTCCGCCGCCACAATGAACTTGCATTAAGGAAGGAAATTCAAGAGCTGCTTACTGGTTGGAGAGCTTATTTTGATGCTTCGAATTGCATATTCGTACATGATCCATCAAGTAGTCGTCAATTGCTCTTTGATGGAGAGAGACCGTATTTTAGTAACCAGCATAATGTTACTAGAAGCATTCCATTGACTGTCCGAAGGCCTACTTTGAGAGAAGCAAAGCGTGTGTATAGCCAGTTGACTCAAGTATCCTATGAGGTAGAAGAGGATTTAGGGTCAACTCCCATTACTGTGAGAAATGCCAACCCAGCCGTTGACAAAGAAGCATTTACTAACTCAGATAGCCAGGATAAAAGTGAGGCTTGTTCAAGTAAACAAGATGATAGTGAACTCCTTATTTCAAGTGCGAGTGAGAGCGAAAATGGGATAATGGGTAAATCAACTCCTTTGCATCAAGCTGTGCAATCTGGTGACTCTCACAAGGTTCTGAAGTTACTGGAACAGGGCATAGATCCTTGCATTAAAGATGAAAGAGGAAGGACCCCTTATATGTTGGCGCATGATAAAGAAGTGCGGAATACTTTCAGAAGGTTCATGGCATCAAACCCTGAAAAATGGGATTGGCGTGCAGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCAGCCAAGCAGGCTGAAAAGGATGCCAAGAGAAAAGCCAGAGCAAAAGAATTAAAAAAATTACGTAAAGCAAAAGAAAAAAGGGCTCAGGCTGAAGCTGCTAAGAATGCTTCCAAAACTGCAGAAAACGAAGTGAATGCTGTAACTTCTACTCAGAAATTATCTAAAGAGGAGGAACTGAGAAGAGCTCAGGCTGAAGAAAGAGAGAAGAGAGCTGGGGCTGCTGAGAGAAGACTTGCTGCCCTCAAGATTCAAGGCAGCAGTGCGACAACCGTCTTGAGCACTTCAGAACCAAAAGGTGGGGCAGCCGGTGACATATATTGTTCCTGTTGTAATATGTCACTTGCTGGTAAAGTTCCATTCCATAGGTATAATTATAAATACTGCAGCAGTTCATGCATGCATGTACACAGGGAGATCTTAGAGGATGGATGA 1881 0.4317 MAKRHRSIFELQPEFFHSCRLLASPRLSASDNLQNCYNSVHETVDPIEKDADGFQDVVFSVPRWTCNTCKAQFDSLQDQRLHFKSDVHRFNVKLTMAGKSIVKEEDFGLLTSDSIKDYDVSSISGSEDDDDGDDDIETRRQNVRDKLSESFRQKLIICLPTGERVSIWKCLVMNMGDNILNENEVIERLKSLTLEPRNKSRLRIVLLASGGHFAGCVFDGDELVAHKTFHRYVVRAKAGKKQSTKDATGRAAHSAGASLRRHNELALRKEIQELLTGWRAYFDASNCIFVHDPSSSRQLLFDGERPYFSNQHNVTRSIPLTVRRPTLREAKRVYSQLTQVSYEVEEDLGSTPITVRNANPAVDKEAFTNSDSQDKSEACSSKQDDSELLISSASESENGIMGKSTPLHQAVQSGDSHKVLKLLEQGIDPCIKDERGRTPYMLAHDKEVRNTFRRFMASNPEKWDWRAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKRAQAEAAKNASKTAENEVNAVTSTQKLSKEEELRRAQAEEREKRAGAAERRLAALKIQGSSATTVLSTSEPKGGAAGDIYCSCCNMSLAGKVPFHRYNYKYCSSSCMHVHREILEDG 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral51g00018 626 ProSiteProfiles Ankyrin repeat profile. 402 434 IPR002110 GO:0005515
Pral51g00018 626 Gene3D - 376 515 IPR036770 -
Pral51g00018 626 Pfam Vms1-associating treble clef domain 589 621 IPR041540 -
Pral51g00018 626 MobiDBLite consensus disorder prediction 478 542 - -
Pral51g00018 626 Pfam Bacteroidetes VLRF1 release factor 204 342 IPR041175 -
Pral51g00018 626 MobiDBLite consensus disorder prediction 367 387 - -
Pral51g00018 626 Coils Coil 478 533 - -
Pral51g00018 626 SUPERFAMILY Ankyrin repeat 401 455 IPR036770 -
Pral51g00018 626 ProSiteProfiles Ankyrin repeat region circular profile. 402 434 - -
Pral51g00018 626 MobiDBLite consensus disorder prediction 481 495 - -
Pral51g00018 626 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 3 625 IPR047139 -
Pral51g00018 626 MobiDBLite consensus disorder prediction 518 535 - -
Pral51g00018 626 Coils Coil 547 567 - -
Pral51g00018 626 ProSitePatterns Zinc finger C2H2 type domain signature. 66 88 IPR013087 -
Pral51g00018 626 SUPERFAMILY beta-beta-alpha zinc fingers 60 96 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral51g00018 Pral-Chr51 356866 385105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral51g00018 3 573 C2H2 Transcription Factor Family AT1G01930 54.054 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral51g00018 K26089 - gmx:100808912 731.865