Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral51g00017 ATGATCTTCCTGCTCAGAGTGAACCAAGGTCGACGGCCGCGAATTCCATGGCGAAGCGACACCGTTCTATATTCGAACTCCAGCCTGAATTTTTTCACTCCTGTCGCCTCCTTGCTTCCCCTCGATTGTCCGCTTCCGACAATCTTCAGAATTGCTACAACTCAGTTCACGAAACCGTTGACCCTATTGAGAAGGACGCTGATGGCTTCCAAGACGTCGTTTTTTCAGTGCCCAGATGGACTTGCAATACTTGCAAGGCTCAATTTGACTCCCTTCAAGACCAGCGTTTGCATTTCAAATCGGATGTTCATCGTTTCAATATATGTTGTGAGGGCTAAGGCAGGGAAAAAACAGTCAACAAAAGATGCTACTGGTAGGGCTGCCCATTCTGCAGGGGCTTCACTCCGCCGCCACAATGAACTTGCATTAAGGAAGGAAATTCAAGAGCTGCTTACTGGTTGGAGAGCTTATTTTGATGCTTCGAATTGCATATTCGTACATGATCCATCAAGTAGTCGTCAATTGCTCTTTGATGGAGAGAGACCGTATTTTAGTAACCAGCATAATGTTACTAGAAGCATTCCATTGACTGTCCGAAGGCCTACTTTGAGAGAAGCAAAGCGTGTGTATAGCCAGTTGACTCAAGTATCCTATGAGGTAGAAGAGGATTTAGGGTCAACTCCCATTACTGTGAGAAATGCCAACCCAGCCGTTGACAAAGAAGCATTTACTAACTCAGATAGCCAGGATAAAAGTGAGGCTTGTTCAAGTAAACAAGATGATAGTGAACTCCTTATTTCAAGTGCGAGTGAGAGCGAAAATGGGATAATGGGTAAATCAACTCCTTTGCATCAAGCTGTGCAATCTGGTGACTCTCACAAGGTTCTGAAGTTACTGGAACAGGGCATAGATCCTTGCATTAAAGATGAAAGAGGAAGGACCCCTTATATGTTGGCGCATGATAAAGAAGTGCGGAATACTTTCAGAAGGTTCATGGCATCAAACCCTGAAAAATGGGATTGGCGTGCAGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCAGCCAAGCAGGCTGAAAAGGATGCCAAGAGAAAAGCCAGAGCAAAAGAATTAAAAAAATTACGTAAAGCAAAAGAAAAAAGGGCTCAGGCTGAAGCTGCTAAGAATGCTTCCAAAACTGCAGAAAACGAAGTGAATGCTGTAACTTCTACTCAGAAATTATCTAAAGAGGAGGAACTGAGAAGAGCTCAGGCTGAAGAAAGAGAGAAGAGAGCTGGGGCTGCTGAGAGAAGACTTGCTGCCCTCAAGATTCAAGGCAGCAGTGCGACAACCGTCTTGAGCACTTCAGAACCAAAAGGTGGGGCAGCCGGTGACATATATTGTTCCTGTTGTAATATGTCACTTGCTGGTAAAGTTCCATTCCATAGGTATAATTATAAATACTGCAGCAGTTCATGCATGCATGTACACAGGGAGATCTTAGAGGATGGATGA 1509 0.4433 MIFLLRVNQGRRPRIPWRSDTVLYSNSSLNFFTPVASLLPLDCPLPTIFRIATTQFTKPLTLLRRTLMASKTSFFQCPDGLAILARLNLTPFKTSVCISNRMFIVSIYVVRAKAGKKQSTKDATGRAAHSAGASLRRHNELALRKEIQELLTGWRAYFDASNCIFVHDPSSSRQLLFDGERPYFSNQHNVTRSIPLTVRRPTLREAKRVYSQLTQVSYEVEEDLGSTPITVRNANPAVDKEAFTNSDSQDKSEACSSKQDDSELLISSASESENGIMGKSTPLHQAVQSGDSHKVLKLLEQGIDPCIKDERGRTPYMLAHDKEVRNTFRRFMASNPEKWDWRAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKRAQAEAAKNASKTAENEVNAVTSTQKLSKEEELRRAQAEEREKRAGAAERRLAALKIQGSSATTVLSTSEPKGGAAGDIYCSCCNMSLAGKVPFHRYNYKYCSSSCMHVHREILEDG 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral51g00017 502 ProSiteProfiles Ankyrin repeat profile. 278 310 IPR002110 GO:0005515
Pral51g00017 502 Pfam Vms1-associating treble clef domain 465 497 IPR041540 -
Pral51g00017 502 Coils Coil 423 443 - -
Pral51g00017 502 MobiDBLite consensus disorder prediction 352 418 - -
Pral51g00017 502 SUPERFAMILY Ankyrin repeat 277 331 IPR036770 -
Pral51g00017 502 MobiDBLite consensus disorder prediction 243 263 - -
Pral51g00017 502 MobiDBLite consensus disorder prediction 357 371 - -
Pral51g00017 502 Coils Coil 354 409 - -
Pral51g00017 502 Gene3D - 242 342 IPR036770 -
Pral51g00017 502 MobiDBLite consensus disorder prediction 394 411 - -
Pral51g00017 502 ProSiteProfiles Ankyrin repeat region circular profile. 278 310 - -
Pral51g00017 502 Pfam Bacteroidetes VLRF1 release factor 106 218 IPR041175 -
Pral51g00017 502 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 108 501 IPR047139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral51g00017 Pral-Chr51 356866 385109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral51g00017 90 449 C2H2 Transcription Factor Family AT1G01930 56.712 2.03e-116 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral51g00017 K26089 - gmx:100527709 465.692