Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral51g00016 ATGGCGAAGCGACACCGTTCTATATTCGAACTCCAGCCTGAATTTTTTCACTCCTGTCGCCTCCTTGCTTCCCCTCGATTGTCCGCTTCCGACAATCTTCAGAATTGCTACAACTCAGTTCACGAAACCGTTGACCCTATTGAGAAGGACGCTGATGGCTTCCAAGACGTCGTTTTTTCAGTGCCCAGATGGACTTGCAATACTTGCAAGGCTCAATTTGACTCCCTTCAAGACCAGCGTTTGCATTTCAAATCGGATGTTCATCGTTTCAATGTGAAGTTGACAATGGCTGGAAAGAGTATTGTTAAGGAAGAAGATTTTGGGCTGTTGACATCTGATTCTATTAAAGACTATGATGTTTCGAGTATATCAGGATCAGAAGATGATGATGATGGTGATGATGATATTGAAACTCGGAGACAAAATGTTCGTGACAAATTAAGTGAAAGTTTTAGGCAGAAGTTAATTATCTGCCTTCCGACAGGGGAAAGAGTTTCTATTTGGAAGTGCTTAGTAATGAACATGGGTGACAATATACTGAATGAGAACGAAGTGATTGAGAGGTTGAAGTCCTTGACTCTTGAGCCCAGGAATAAATCTCGCTTGAGAATTGTGCTGCTTGCATCTGGTGGGCACTTTGCAGGTTGTGTGTTTGATGGTGATGAGCTTGTGGCTCACAAGACATTCCACAGATATGTTGTGAGGGCTAAGGCAGGGAAAAAACAGTCAACAAAAGATGCTACTGGTAGGGCTGCCCATTCTGCAGGGGCTTCACTCCGCCGCCACAATGAACTTGCATTAAGGAAGGAAATTCAAGAGCTGCTTACTGGTTGGAGAGCTTATTTTGATGCTTCGAATTGCATATTCGTACATGATCCATCAAGTAGTCGTCAATTGCTCTTTGATGGAGAGAGACCGTATTTTAGTAACCAGCATAATGTTACTAGAAGCATTCCATTGACTGTCCGAAGGCCTACTTTGAGAGAAGCAAAGCGTGTGTATAGCCAGTTGACTCAAGTATCCTATGAGGTAGAAGAGGATTTAGGGTCAACTCCCATTACTGTGAGAAATGCCAACCCAGCCGTTGACAAAGAAGCATTTACTAACTCAGATAGCCAGGATAAAAGTGAGGCTTGTTCAAGTAAACAAGATGATAGTGAACTCCTTATTTCAAGTGCGAGTGAGAGCGAAAATGGGATAATGGGTAAATCAACTCCTTTGCATCAAGCTGTGCAATCTGGTGACTCTCACAAGGTTCTGAAGTTACTGGAACAGGGCATAGATCCTTGCATTAAAGATGAAAGAGGAAGGACCCCTTATATGTTGGCGCATGATAAAGAAGTGCGGAATACTTTCAGAAGGTTCATGGCATCAAACCCTGAAAAATGGGATTGGCGTGCAGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCAGCCAAGCAGGCTGAAAAGGATGCCAAGAGAAAAGCCAGAGCAAAAGAATTAAAAAAATTACGTAAAGCAAAAGAAAAAAGGGCTCAGGCTGAAGCTGCTAAGAATGCTTCCAAAACTGCAGAAAACGAAGTGAATGCTGTAACTTCTACTCAGAAATTATCTAAAGAGGAGGAACTGAGAAGAGCTCAGGCTGAAGAAAGAGAGAAGAGAGCTGGGGCTGCTGAGAGAAGACTTGCTGCCCTCAAGATTCAAGGCAGCAGTGCGACAACCGTCTTGAGCACTTCAGAACCAAAAGGTAAGCATGAATGTTGA 1761 0.4321 MAKRHRSIFELQPEFFHSCRLLASPRLSASDNLQNCYNSVHETVDPIEKDADGFQDVVFSVPRWTCNTCKAQFDSLQDQRLHFKSDVHRFNVKLTMAGKSIVKEEDFGLLTSDSIKDYDVSSISGSEDDDDGDDDIETRRQNVRDKLSESFRQKLIICLPTGERVSIWKCLVMNMGDNILNENEVIERLKSLTLEPRNKSRLRIVLLASGGHFAGCVFDGDELVAHKTFHRYVVRAKAGKKQSTKDATGRAAHSAGASLRRHNELALRKEIQELLTGWRAYFDASNCIFVHDPSSSRQLLFDGERPYFSNQHNVTRSIPLTVRRPTLREAKRVYSQLTQVSYEVEEDLGSTPITVRNANPAVDKEAFTNSDSQDKSEACSSKQDDSELLISSASESENGIMGKSTPLHQAVQSGDSHKVLKLLEQGIDPCIKDERGRTPYMLAHDKEVRNTFRRFMASNPEKWDWRAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKRAQAEAAKNASKTAENEVNAVTSTQKLSKEEELRRAQAEEREKRAGAAERRLAALKIQGSSATTVLSTSEPKGKHEC 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral51g00016 586 ProSiteProfiles Ankyrin repeat profile. 402 434 IPR002110 GO:0005515
Pral51g00016 586 MobiDBLite consensus disorder prediction 367 387 - -
Pral51g00016 586 Coils Coil 478 533 - -
Pral51g00016 586 MobiDBLite consensus disorder prediction 483 586 - -
Pral51g00016 586 ProSiteProfiles Ankyrin repeat region circular profile. 402 434 - -
Pral51g00016 586 SUPERFAMILY Ankyrin repeat 401 455 IPR036770 -
Pral51g00016 586 Gene3D - 377 524 IPR036770 -
Pral51g00016 586 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 3 567 IPR047139 -
Pral51g00016 586 MobiDBLite consensus disorder prediction 518 535 - -
Pral51g00016 586 Pfam Bacteroidetes VLRF1 release factor 204 342 IPR041175 -
Pral51g00016 586 SUPERFAMILY beta-beta-alpha zinc fingers 60 96 IPR036236 -
Pral51g00016 586 Coils Coil 547 567 - -
Pral51g00016 586 MobiDBLite consensus disorder prediction 536 559 - -
Pral51g00016 586 ProSitePatterns Zinc finger C2H2 type domain signature. 66 88 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral51g00016 Pral-Chr51 355616 385106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral51g00016 3 573 C2H2 Transcription Factor Family AT1G01930 54.054 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral51g00016 K26089 - gmx:100808912 645.195