Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5197g00005 ATGGAGATGTCAAGTGGAGGAGGAGGAATGAGCAGTGCGATAGAAGATGTGATAATAATGGGAGGATTGATCGGAGTGCAATTTGTGTATGCCGGCAACGCTGTGCTTATGAGTTTTCTTATGGCTTTGGGTCTCACCCCTCTCACCCTTGTCATTTTCACTTCCTTCGCCACCTTCCTCGTTCTTCTACCCTTTTCCTTCTACTTTGAAAGGACTAAATGGCCCAGAAAATTCAGTCTCAAGTTTGTTATCCAGCTATTGGTGCTTTCGTTTGGAGGGGTAACTTTGTTCCAGTCGTTATTCCTGAGGGGAATCAATCTAACTTCGCCAGCAATGGGAACTGCCATGCCCAACCTTGCCCCAGGTCTTATCTTTATCATCGCATGGACTTTTGGGTTAGAGAAAGTGGACCTAAGTTGTACGTATAGTAAAGTGAAGATTATAGGGACAATGGTGTGCATGATCGGAGCTTTCACAATGAGCATAATGCAAAGCGTAACGCCTCATGCAGCCACAGCCACGGACACACAGTCTTCTCAGTCACCACATACTCACAATTCCACCTTTGACTCTGACAAAATCATTGGTTCTCTCTACCTCATGGCTGCTGTCTTCATGTTATCCTGCACTATTGTCCTTCAGGCGTTTACATTGGGAGATTTCCCAGCACCCATGACATTAAGTGCATTGACATCCTTGTTAGGAGCCATAACCACCATCATTGCTCAGTTGCTCGAGCAGCGCTCTTTTGACACTTCCTCCTTTGTCAACTTTGGAGCCCTCGCCTCTTATTCTTTGCTGTCAGGTGGGTTGGGTGGAATATGCCTAAGCTTCAATGGATGGGCTCTTAAGAAGAGAGGTCCTGTCTTGGTCTCTATGTTCAGCCCTGTTGCTACTGTCTGCTCCCTCCTCTCTTCTCTTACTCTTGGCTATTCCACTAATCTTGGAAGCATTGCGGGGATGTTTCTGATGTTCACGGGGCTCTACTTTGTGCTGTGGGCAAAAGGAAAAGAAGGTTACGCTAACTTTGATTTTGGCTCAGAGAGTGAGTTTGATGCAGAGAAGCCTCTCCTTAGTTGA 1080 0.463 MEMSSGGGGMSSAIEDVIIMGGLIGVQFVYAGNAVLMSFLMALGLTPLTLVIFTSFATFLVLLPFSFYFERTKWPRKFSLKFVIQLLVLSFGGVTLFQSLFLRGINLTSPAMGTAMPNLAPGLIFIIAWTFGLEKVDLSCTYSKVKIIGTMVCMIGAFTMSIMQSVTPHAATATDTQSSQSPHTHNSTFDSDKIIGSLYLMAAVFMLSCTIVLQAFTLGDFPAPMTLSALTSLLGAITTIIAQLLEQRSFDTSSFVNFGALASYSLLSGGLGGICLSFNGWALKKRGPVLVSMFSPVATVCSLLSSLTLGYSTNLGSIAGMFLMFTGLYFVLWAKGKEGYANFDFGSESEFDAEKPLLS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5197g00005 359 PANTHER WAT1-RELATED PROTEIN 23 339 IPR030184 GO:0016020|GO:0022857
Pral5197g00005 359 Pfam EamA-like transporter family 195 332 IPR000620 GO:0016020
Pral5197g00005 359 Pfam EamA-like transporter family 24 161 IPR000620 GO:0016020
Pral5197g00005 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5197g00005 Pral-Chr5197 26451 32803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5197g00005 11 344 Nodulin-like Gene Family AT5G47470 56.380 9.98e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5197g00005 - - gmx:100809182 444.506