Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5191g00028 ATGGATCCCAAGGGCTCAAAGCAATCGCAGCAGGAGGTACCCAACTTCTTGAGTCTCCCACAACCACAAGCCAACATCATGGGAGAGAACAAGCCGGCAGAAATCAAGGATTTCCAGATTGCGATAGCCGATAAAGAAGACAATAACAAGAAGCAGTTAGCGCCCAAGAGGAGCTCCAACAAAGACAGACACACCAAAGTAGAGGGCAGAGGAAGGAGGATACGGATGCCCGCTCTGTGTGCCGCTAGGATCTTCCAGTTGACCAGAGAGTTGGGTCACAAATCTGACGGCGAAACCATTCAGTGGCTTCTCCAGCAGGCGGAGCCTTCGATCATCGCGGCCACCGGAAGCGGCACGATCCCGGCATCAGCTTTAGCTGCTGCAGGTGGCTCTGTTTCACAACAGGGGACTTCTCTGTCTGCAGGATTGCATCAGAAAATTGATGAATATGGGGGGTCCAATATTGGGTCGGGCAGTAGGACCGGGTGGGCTATGGTGGGCGGAAATCTGGGGAGACCCCATATGGCTACTGGCATATGGCCCCCAGTTAGTGGGTTCGGGTTTCAGTCATCATCGGGTCCATCCACACCAAGTCTTGGAAGCGAGAGTTCAAATTACCTGCAAAAGATTGGCTTCCCTGGCTTTGACTTGCCTCCGGCAGCCACGAACATGGGTGCTATGAGTTTCACCTCAATTTTAGGTGGAACTAACCAGCAAATGCCCGGCTTGGAGCTTGGTTTGTCTCAAGATGGTCACATCGGTGTTATCAACCCACAAGCCTTGTCCCAGATTTATCAGCAGATGGGTCAGGCCAGAGTACACCAGCAGCAGCAGAATCAGCATCAGCATCAGCAGCCTCCTTCCAAGGAAGACTCTCAGGGCTCTGGACAGTGA 894 0.5291 MDPKGSKQSQQEVPNFLSLPQPQANIMGENKPAEIKDFQIAIADKEDNNKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALAAAGGSVSQQGTSLSAGLHQKIDEYGGSNIGSGSRTGWAMVGGNLGRPHMATGIWPPVSGFGFQSSSGPSTPSLGSESSNYLQKIGFPGFDLPPAATNMGAMSFTSILGGTNQQMPGLELGLSQDGHIGVINPQALSQIYQQMGQARVHQQQQNQHQHQQPPSKEDSQGSGQ 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5191g00028 297 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 235 IPR005333 GO:0003700
Pral5191g00028 297 MobiDBLite consensus disorder prediction 43 69 - -
Pral5191g00028 297 ProSiteProfiles TCP domain profile. 60 114 IPR017887 -
Pral5191g00028 297 MobiDBLite consensus disorder prediction 1 25 - -
Pral5191g00028 297 Pfam TCP family transcription factor 59 150 IPR017887 -
Pral5191g00028 297 MobiDBLite consensus disorder prediction 267 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5191g00028 Pral-Chr5191 151628 154417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5191g00028 1 297 TCP Transcription Factor Family AT3G27010 55.657 3.16e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral5191g00028 TCP 4.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5191g00028 - - cave:132180810 472.241