Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5191g00027 ATGGGAGAGAACAAGCCGGCAGAAATCAAGGATTTCCAGATTGCGATAGCCGATAAAGAAGACAATAACAAGAAGCAGTTAGCGCCCAAGAGGAGCTCCAACAAAGACAGACACACCAAAGTAGAGGGCAGAGGAAGGAGGATACGGATGCCCGCTCTGTGTGCCGCTAGGATCTTCCAGTTGACCAGAGAGTTGGGTCACAAATCTGACGGCGAAACCATTCAGTGGCTTCTCCAGCAGGCGGAGCCTTCGATCATCGCGGCCACCGGAAGCGGCACGATCCCGGCATCAGCTTTAGCTGCTGCAGGTGGCTCTGTTTCACAACAGGGGACTTCTCTGTCTGCAGGATTGCATCAGAAAATTGATGAATATGGGGGGTCCAATATTGGGTCGGGCAGTAGGACCGGGTGGGCTATGGTGGGCGGAAATCTGGGGAGACCCCATATGGCTACTGGCATATGGCCCCCAGTTAGTGGGTTCGGGTTTCAGTCATCATCGGGTCCATCCACACCAAGTCTTGGAAGCGAGAGTTCAAATTACCTGCAAAAGATTGGCTTCCCTGGCTTTGACTTGCCTCCGGCAGCCACGAACATGGGTGCTATGAGTTTCACCTCAATTTTAGGTGGAACTAACCAGCAAATGCCCGGCTTGGAGCTTGGTTTGTCTCAAGATGGTCACATCGGTGTTATCAACCCACAAGCCTTGTCCCAGATTTATCAGCAGATGGGTCAGGCCAGAGTACACCAGCAGCAGCAGAATCAGCATCAGCATCAGCAGCCTCCTTCCAAGGAAGACTCTCAGGGCTCTGGACAGTGA 816 0.5294 MGENKPAEIKDFQIAIADKEDNNKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALAAAGGSVSQQGTSLSAGLHQKIDEYGGSNIGSGSRTGWAMVGGNLGRPHMATGIWPPVSGFGFQSSSGPSTPSLGSESSNYLQKIGFPGFDLPPAATNMGAMSFTSILGGTNQQMPGLELGLSQDGHIGVINPQALSQIYQQMGQARVHQQQQNQHQHQQPPSKEDSQGSGQ 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5191g00027 271 ProSiteProfiles TCP domain profile. 34 88 IPR017887 -
Pral5191g00027 271 MobiDBLite consensus disorder prediction 14 44 - -
Pral5191g00027 271 MobiDBLite consensus disorder prediction 241 271 - -
Pral5191g00027 271 Pfam TCP family transcription factor 33 125 IPR017887 -
Pral5191g00027 271 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 224 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5191g00027 Pral-Chr5191 149378 154417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5191g00027 7 271 TCP Transcription Factor Family AT3G27010 59.786 8.19e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral5191g00027 TCP 4.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5191g00027 - - cave:132180810 444.121