Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5191g00022 ATGGAGAGCTACCCCGTGTTATTTCCTTGTCCTAATCCTTCGAATTATTCGGTTGCCACCAGTGCCATGGGAAGCTCTCACGGTTTGAGCAATAACATGGAGGGCCAGATTAAGTCTGGCGGGTTCCTGGGTTTGAGGCCTGCTGAAAGTGATGAGAGCTTATCGAGGAGCAAGGAGCAAGGTGGTTCTGGGAAGAAGAAGGGCGAGAAGAAGGCGCGGAAGCCTAGGCATGCTTTTCAAACGAGGAGTCAGGTAGATATACTGGATGATGGCTATCGGTGGAGAAAATATGGCCAGAAAGCTGTCAAAAACAACAAGTTCCCCAGGAGCTACTACAGGTGTACGCATCAAGGGTGTAATGTGAAGAAGCAAGTGCAACGGCTGACGAAAGACGAAGGCGTAGTGGTGACCACATACGAGGGAGCGCACAACCATCCCATTGAGAAGACCACCGACAACTTCGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTAG 504 0.494 MESYPVLFPCPNPSNYSVATSAMGSSHGLSNNMEGQIKSGGFLGLRPAESDESLSRSKEQGGSGKKKGEKKARKPRHAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGAHNHPIEKTTDNFEHILSQMQIYTPF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5191g00022 167 MobiDBLite consensus disorder prediction 51 66 - -
Pral5191g00022 167 MobiDBLite consensus disorder prediction 15 82 - -
Pral5191g00022 167 Pfam WRKY DNA -binding domain 89 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5191g00022 167 Gene3D WRKY domain 73 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5191g00022 167 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 37 150 IPR044810 GO:0003700
Pral5191g00022 167 SUPERFAMILY WRKY DNA-binding domain 80 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5191g00022 167 MobiDBLite consensus disorder prediction 15 37 - -
Pral5191g00022 167 ProSiteProfiles WRKY domain profile. 83 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5191g00022 167 SMART WRKY_cls 88 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5191g00022 167 FunFam WRKY transcription factor 57 74 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5191g00022 Pral-Chr5191 108369 109987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5191g00022 76 167 WRKY Transcription Factor Family AT5G13080 85.870 7.13e-58 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5191g00022 WRKY 1.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5191g00022 - - pvu:PHAVU_001G088200g 236.113