Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5191g00021 ATGGACTGGGACTGGAAAGAGTTGGCCTGGGATCCGTCTGGGTCGGAGCTATCAAATGGAGCGGCTTCCGTGGATTTGAGTCTTGGAGAGACTCCCGATTTCATACAGAAATCACCCTCATATACACCAAAGGACTTGCCGAGAGACTCGAAATCGGCATCATCGCCATGCGGCTCGTCAAAGAGGAGCCGTACGCTGAGTGGATCGACGCAGAGCGTGTCGTGCTTGGTGGATGGATGCGACTCCGACCTGAGTGATTGCAGAGAGTATCATCGGCGACACAGAGTGTGTGAGAAGCACTCCAAGACGCCCATTGTGTTGGTAGGGGGAAAGCAGCAGCGATTCTGCCAGCAATGCAGCAGATTTCATTCCCTCGGAGAGTTTGATGAAGTTAAGAGGAGTTGCAGGAAACGTCTTGATGGACATAACAGGCGCAGAAGGAAGCCTCAGCCACCTTCTCTTTTCATGGCTGCTGAGAAATTCCTGAGCGGCTATAAAGGGCCCAGAATCCTTCATTTTGGTAGTCCTCAGACGTACAACTACCCGTTCGTGAGAAGTATGTGGCCTGCCACTGCCAAAGCTGGAGCTGGACCAGTGATGATCAGTTATGACCAAAACAGTCTGCTAAATTCCTTTGCTAATGTAGAGCATCAGCAGGATAAGCAACTTCCTTTCTTTGGGTTAAACAGCTCTAAAGTAGGTCATGGTAATGAGGCAGTGTCTGGAATTCCCATGAGCCAAACAACTTCTGGTGCCTTTGCCCCATCAGCAAGTGCAAATGGTGGTCGGAAGCTTGCTTCTGATTGCGAACCTGGATCTATTGATTCAAATTGTGCTCTCTATCTTCTGTCAACACTTCAGACTCAAAGTCAAGAGTTGAGCTTGGTGCAGTCCACCGTAAACTGTCCAGTGCAATCATCTCCATTAGAAGATTTGCATTTTGATGCTGGGGATAAATACTCATCATGCTCAGAAAGTCCACAAGAAAAGTCTACTAATCCATTATTGGTTGTGGATGCCGACACAGCCAACCTTGATTACGACCATACGATGCACATGAGGCCTGATGAAATTGTGGAAAATGGGGACTTGCCGACCTTTCCATTTTTCTGGGAGTAG 1119 0.4844 MDWDWKELAWDPSGSELSNGAASVDLSLGETPDFIQKSPSYTPKDLPRDSKSASSPCGSSKRSRTLSGSTQSVSCLVDGCDSDLSDCREYHRRHRVCEKHSKTPIVLVGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPPSLFMAAEKFLSGYKGPRILHFGSPQTYNYPFVRSMWPATAKAGAGPVMISYDQNSLLNSFANVEHQQDKQLPFFGLNSSKVGHGNEAVSGIPMSQTTSGAFAPSASANGGRKLASDCEPGSIDSNCALYLLSTLQTQSQELSLVQSTVNCPVQSSPLEDLHFDAGDKYSSCSESPQEKSTNPLLVVDADTANLDYDHTMHMRPDEIVENGDLPTFPFFWE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5191g00021 372 SUPERFAMILY SBT domain 73 154 IPR036893 GO:0003677|GO:0005634
Pral5191g00021 372 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 17 294 IPR044817 GO:0003677
Pral5191g00021 372 MobiDBLite consensus disorder prediction 242 256 - -
Pral5191g00021 372 Pfam SBP domain 75 148 IPR004333 GO:0003677
Pral5191g00021 372 MobiDBLite consensus disorder prediction 28 66 - -
Pral5191g00021 372 FunFam Squamosa promoter-binding-like protein 14 66 136 - -
Pral5191g00021 372 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Pral5191g00021 372 MobiDBLite consensus disorder prediction 242 265 - -
Pral5191g00021 372 MobiDBLite consensus disorder prediction 33 66 - -
Pral5191g00021 372 Gene3D - 66 136 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5191g00021 Pral-Chr5191 98234 100592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5191g00021 68 190 SBP-box Gene Family AT5G50670 59.350 2.49e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pral5191g00021 SBP 1.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5191g00021 - - gmx:100792071 413.305