Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5191g00012 ATGGCGATGGATGTAGAGCAGAAACTTGAATCAGGGTTCCCGTACTGGAAGGCTATCCGTCGCCGTTTCGGCCCGGACTCTCCTTTCTTTGCTTCCGGTAATATCGAACGGGAACTTCTTGCTAAACAGATTGCCTTGGAATTAACTGCGGAAGAGAAGCAACAGCTTTTTGTACCAGATGAATACAGGAAAGTCCCCTGTCCCATTGTTGGTTGTGGAGCATGCTTGACTTCCTTGGAGGAATTTGAGAATCATTATAATGCACGGCATACTGCCTCTTGTTCGGTGTGTTCTAGAGTCTACCCGACATCTCGCTTGCTAAGCATACATGTTTCTGAAGTGCATGATTCGTTCTTTCAAGCAAAGGCTGCTCGGGGCTATGATGTGTATGAATGCCTAGTGGAAGGCTGTGGTTTAAAGTTTAAAAACTACAAGAGTAGGCAACAGCACCTCATTGACAAGCATAAGTTCCCCACTTCCTTTGAGTTTCTAAAGAAGGCTCGACCATCAAAGAAACAAAGGCAGAAGATTCAACGGAAACAAGCTCCACAAAAGGAGAATGATTCAAGAACAATGGAAGTGGATAATGCAACCATGGATGGCCTTGTGACGGCAGTCTCTAAATTGAGTACTTCGGACTCAACTCCATCATCTGTCAGCTTTGGTCGCCGGCATACTCGTGGTTTGACATTTGTCCCTAGAGCTGTTCAGCGTGAAGCCGGATCAAACGCTGCATCACCTAGAAGAAAGCAGTGA 756 0.4603 MAMDVEQKLESGFPYWKAIRRRFGPDSPFFASGNIERELLAKQIALELTAEEKQQLFVPDEYRKVPCPIVGCGACLTSLEEFENHYNARHTASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKAARGYDVYECLVEGCGLKFKNYKSRQQHLIDKHKFPTSFEFLKKARPSKKQRQKIQRKQAPQKENDSRTMEVDNATMDGLVTAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVQREAGSNAASPRRKQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5191g00012 251 PANTHER UNCHARACTERIZED 10 239 IPR039258 -
Pral5191g00012 251 SMART c2h2final6 65 90 IPR013087 -
Pral5191g00012 251 SMART c2h2final6 130 155 IPR013087 -
Pral5191g00012 251 SMART c2h2final6 92 115 IPR013087 -
Pral5191g00012 251 ProSitePatterns Zinc finger C2H2 type domain signature. 67 90 IPR013087 -
Pral5191g00012 251 ProSitePatterns Zinc finger C2H2 type domain signature. 94 115 IPR013087 -
Pral5191g00012 251 MobiDBLite consensus disorder prediction 179 193 - -
Pral5191g00012 251 ProSitePatterns Zinc finger C2H2 type domain signature. 132 155 IPR013087 -
Pral5191g00012 251 MobiDBLite consensus disorder prediction 203 224 - -
Pral5191g00012 251 MobiDBLite consensus disorder prediction 164 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5191g00012 Pral-Chr5191 65529 67668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5191g00012 2 246 C2H2 Transcription Factor Family AT5G14140 64.706 2.39e-120 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral5191g00012 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5191g00012 - - pvy:116145577 369.007