Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5191g00003 ATGGCGGGAGAGGGGCAGCTCAAGCAAAGCACATCTCCAGGCCGCCATTCTGCTACTGCTTCTCCTTCTATTTCTCTTCCAGGGAAGAACGATGATCCCAAACAAAAATGCTGGAGGAAGCAAGCGGACGAGAATCTCAAGAGGCTTCACTCTCTTCTCTTCGGGGCCGATCTTGCCCTTCAGAGAGATGATTTTGAGTCGGCGTACATCCTCGGGCTTCGCCTCATCGGCTTTCTTGACTCTCACTGCCACTCCGATGTCGATGAAGCCTATATACGTCCAATTCGCCGTGAAGTCCTGGGGAAAATCGACACCGCTCGTCGATCCCTCATTCCAGACTCCGATCGCCAAGCGTTTGAACAAGCAAAAAAGCCTCCAGGGTGTATTTTTGGCAAAACGGGAGATATTGACATTGGGAAAATTAAGAAGTCGAAGTACTTCCAAGCTCTTCTCAAGGAGTCCAAAGAAAAGGTGGAGAATCGATCGGTTATACTGAATATATCAAGACAAAGCATTCAGAAAATGCCAAAAGAATTCTTGCAAACGAAGCTAACATCAATGTACGGGAGAAGTACATTGAGGTCTAATAGTAGTTCCAAATTGAGTTGGAAACATAACAGATCTGAGGACTGCATGATTGTTGAAAAGCCGCTGTCACATGGTGGCCACAGTAAGGCTCATCCTGTCTCTTCTTTCTTGAAAACTGAAGGCGAAGAAAGAACTTCCGGAATCCTGGGAACAAAGCGTGTGCACTCGGAAACTGATAGCCCCCAAGTTAGTAACGTGAAGTCGCCTTCAAGCAATGAGGAACCTAAGTCTGATGCCTGTGGCAGTGGGTTTGTTACTGCCAGAGCTAAATTGGAAATGGAAACAAGGCAGAAGCGAGAAGGGATTGGCTCACCCACTGCATCTGTCTCCCAATATGATAACAATTCTTTGAATCGGGTATATAGTGGGAGATCATATGGTGTTTCTCGACGTGGCCTACGTGGAAATTTTGTACCTCCTATTAAATCCAATGGAACTGGCGATGGAAATATGACATCACGGATTTCTGGAAAGTGTGATGATACTTTGGATGACTCAACAAAGAGATGTTTGGAAGGGCTATGTGGTCCTGACGGAGAGCTTCCTGAGAAATTGAGGAATATAGAGCCTCGCCTTATCGAACATGTTAGCAATGAGATTATGGATAGAGATCCTAATGTCCGGTGGAATGACATTGCGGGATTGGAGCATGCCAAGAAATGTGTCACTGAGATGGTCATATGGCCTCTGCTACGTCCTGATATATTTAAGGGATGCCGCTCTCCTGGGAGAGGATTACTTTTATTTGGTCCACCAGGAACTGGTAAAACAATGATAGGAAAAGCCATAGCAGGGGAGGCAAAGGCAACCTTCTTTTACATATCGGCGAGTTCATTGACAAGCAAGTGGATTGGAGAAGGTGAAAAACTAGTGAGAGCCCTCTTTGGAGTTGCCAGTTGTCGCCAGCCGGCTGTTATATTTGTCGATGAAATAGATTCTCTCCTATCTCAGCGTAAGTCAGAGGGTGAACATGAATCAAGCAGAAGGCTAAAGACACAATTTCTCATTGAAATGGAAGGTTTTGATAGCGGTAACGAGCAGGTTCTTCTTATAGGGGCCACCAACCGTCCCCAGGAGCTTGATGAAGCAGCACGAAGGCGTCTTACCAAAAGACTTTATATTCCCCTGCCATCCTCAGAGGCAAGAGCCTGGATTGTACGTAACCTCCTAGAGAAGGACGGACTATTCAAGCTGTCAAAGGAAGAGATTGATACCATATGCAACAAAACGGAAGGTTATTCGGGATCAGACATGAAAAATTTAGTGAAGGATGCTTCAATGGGTCCCCTAAGAGAGGCTTTAAAGAAGGGCATTGAAATTACTAAGTTGAACAAGGAAGATATGCGGCCAGTAGCTCTTCAGGACTTTATGGATGCCCTAAAAGAGGTGAGGCGATCTGTTTCCTCAAATGAGCTCGGCGCTTACGAAAAATGGAACGAACAATTTGGAAGCCTATCATCGGAGAAGCTCGAGTCATCTGGATGA 2073 0.4578 MAGEGQLKQSTSPGRHSATASPSISLPGKNDDPKQKCWRKQADENLKRLHSLLFGADLALQRDDFESAYILGLRLIGFLDSHCHSDVDEAYIRPIRREVLGKIDTARRSLIPDSDRQAFEQAKKPPGCIFGKTGDIDIGKIKKSKYFQALLKESKEKVENRSVILNISRQSIQKMPKEFLQTKLTSMYGRSTLRSNSSSKLSWKHNRSEDCMIVEKPLSHGGHSKAHPVSSFLKTEGEERTSGILGTKRVHSETDSPQVSNVKSPSSNEEPKSDACGSGFVTARAKLEMETRQKREGIGSPTASVSQYDNNSLNRVYSGRSYGVSRRGLRGNFVPPIKSNGTGDGNMTSRISGKCDDTLDDSTKRCLEGLCGPDGELPEKLRNIEPRLIEHVSNEIMDRDPNVRWNDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGNEQVLLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLFKLSKEEIDTICNKTEGYSGSDMKNLVKDASMGPLREALKKGIEITKLNKEDMRPVALQDFMDALKEVRRSVSSNELGAYEKWNEQFGSLSSEKLESSG 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5191g00003 690 FunFam Fidgetin-like 1 401 583 - -
Pral5191g00003 690 MobiDBLite consensus disorder prediction 217 277 - -
Pral5191g00003 690 Pfam AAA+ lid domain 599 634 IPR041569 -
Pral5191g00003 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 678 IPR027417 -
Pral5191g00003 690 Pfam Vps4 C terminal oligomerisation domain 645 679 IPR015415 -
Pral5191g00003 690 Gene3D - 573 659 - -
Pral5191g00003 690 PANTHER AAA DOMAIN-CONTAINING 200 680 - -
Pral5191g00003 690 MobiDBLite consensus disorder prediction 1 36 - -
Pral5191g00003 690 Gene3D - 401 675 IPR027417 -
Pral5191g00003 690 FunFam Fidgetin like 1 573 659 - -
Pral5191g00003 690 MobiDBLite consensus disorder prediction 247 273 - -
Pral5191g00003 690 Pfam ATPase family associated with various cellular activities (AAA) 442 572 IPR003959 GO:0005524|GO:0016887
Pral5191g00003 690 MobiDBLite consensus disorder prediction 1 28 - -
Pral5191g00003 690 ProSitePatterns AAA-protein family signature. 544 563 IPR003960 GO:0005524|GO:0016887
Pral5191g00003 690 SMART AAA_5 438 574 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5191g00003 Pral-Chr5191 13619 19444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5191g00003 357 681 Calmodulin-binding Proteins AT3G56690 31.845 1.40e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5191g00003 K22766 - qsa:O6P43_004816 961.444