Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5189g00006 ATGGCAGAAATGATCACCAAGCTTCTCCACCTGAGAGCTTTGGCCTTTCTGTTCTTCTGCCTCTTTGTCTTTTCGCTCGGAGAAGAGCTGACTAGCTGCAACACAACATCATATCCAGATGTCTCTGGCTACCGTTGCAGTAAAAATGAATCACAATGTGGAACATTTGCAGTTTTCTTTACCAATTCATACTACTCATCTCTCTTCAATTTGAGCTTTTACTTGGGATTCAACCGTTACGTGATTGCAGATGCAAATGGGTTTTCTGCAGAAACAGAGTTTCTTCTTCATGATCAACCTTTACTAATACCAATAGACTGCAAATGCAAAGGTGGCTTCTATAGCGCTGAGATAAGCAAGACTACCATTAAAGGTGAGAGCTTTTATGGTATTGCTCAATCGTTGGAAGGCTTGACAACCTGCATGGCTATTAGTGATAAGAATCCAGGCGTGTCACCTTGGGATCTCGATGATGATACCAGATTGCTGATCCCTCTGAGATGTGCGTGTCCCTTATCATCTAAAGTTTCTCCAGAGCCAAAGCTTGTGATTTCTTACCCTGTGACAGAAGGCGATACAGTTCACAATTTGGCATCAAAGTTTAATACTACCGCCGAAGCAATAATCTCCGCAAATAGCATATTTTCCAGAGATTTTAACCCCGCGAAGCTCACACCCTTTACCTCGCTTCTCATCCCACTTAATGGTAAGCCTGTTCTTGGTTCTCTGGCCAAACCCAAGGAACCCAGTTCTGGTAATCAATCAAGCAGCATTACAGCAATTAAACCACCACATAGGAAACCCAAAACGTGGAAGGGTGAACTGTACATTGGGTTAGCTGGGGTCGTAGTCGGACTTCTGTTTGCTTTTCTAGCAGCTTTTGCGGTGGTTCGATTGAGAAACGAGAAGAAAGAGAAATCTGCCAAAAGAAACAATTTGGAGCTGCAACATCTTGATATGAGTGTAAGAACCACCAGCGACAAGAAAGTTTCGTTCGAGGGATCCCACTATGGGAAAATCATCGACACAACTCCTCGTAAGATGCTGCTGGAGACATACACTATTGAAGACCTCGGAAAAGCAACGGAGGATTTCAGTTCAAGCAATCTCATAGAAGGACCTGTATTTCACGGCCGTCTAGAAGGGAAGAACATGGCAATCAAGCAAACACACACAGAGACGGTGTTAAAAATCGACATGGGGCTCTTCCATAACCCGATCCACCATCATCCCAACATTCTTCGGATGCTCGGAACGTGTTTAACAGAAGGTCCCGAGTCATACCTGGTCTTCGAGTATGCAAAAAACGGGTCTTTGAAAGACTGGCTTCATGGTGGGTTGGCCATAAAGAACGAGTTCATATCATCCTGCTATTGCTTCCTCGAATGGAGTCAGAGGCTCAGGATCTGCCTAGACGTGGCCATGGCCCTGCAATATATGCACCACGTCATGAACCCAAGCTATGTCCATAGAAATATCAAGAGCAGGAACATCTTTCTAGACGAAGAATTTGGTGCCAAGATAGGGAACTTTGGGATGGCAGGGTGTGCTGAGAACGAGACAGAGGATCCAAAGTTCTACTCGACCAACCCTGCATCTTGGAGTCTTGGTTATTTGGCACCAGAATATGTACACCAAGGTGCAATTTCTACAAGCACTGATATTTTCGCTTATGGGGTGGTTTTGCTGGAAGTTCTGTCTGGTCAGACACCTATAAGCAGACCGATTGAGAAGGGAGAAGGAAGCGTTTGGCTCACTGATAAAATAAAGTCTGTTTTGAAGTCAGAAAGTGAGGAAGAACTGAGAGGGTGGATGGACAAGACATTAGGTGAGAATTATTCATTCGATGCAGCAGTAACGGTGGCAAACATTGCTAGAGCTTGTGTGGAGGAAGATTATGGTATGAGGCCAAGTGCAGGGGAAGTCGTGGAAAAGCTAACCAGATTGGTCAAGGAACTTCCGGAAGAAGACCACATGCTGATGTCTGAAAGCTCTTCCAAGCCTCTGGTGAAAGCACCAGCAAAACCCTGA 2031 0.4495 MAEMITKLLHLRALAFLFFCLFVFSLGEELTSCNTTSYPDVSGYRCSKNESQCGTFAVFFTNSYYSSLFNLSFYLGFNRYVIADANGFSAETEFLLHDQPLLIPIDCKCKGGFYSAEISKTTIKGESFYGIAQSLEGLTTCMAISDKNPGVSPWDLDDDTRLLIPLRCACPLSSKVSPEPKLVISYPVTEGDTVHNLASKFNTTAEAIISANSIFSRDFNPAKLTPFTSLLIPLNGKPVLGSLAKPKEPSSGNQSSSITAIKPPHRKPKTWKGELYIGLAGVVVGLLFAFLAAFAVVRLRNEKKEKSAKRNNLELQHLDMSVRTTSDKKVSFEGSHYGKIIDTTPRKMLLETYTIEDLGKATEDFSSSNLIEGPVFHGRLEGKNMAIKQTHTETVLKIDMGLFHNPIHHHPNILRMLGTCLTEGPESYLVFEYAKNGSLKDWLHGGLAIKNEFISSCYCFLEWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFGAKIGNFGMAGCAENETEDPKFYSTNPASWSLGYLAPEYVHQGAISTSTDIFAYGVVLLEVLSGQTPISRPIEKGEGSVWLTDKIKSVLKSESEEELRGWMDKTLGENYSFDAAVTVANIARACVEEDYGMRPSAGEVVEKLTRLVKELPEEDHMLMSESSSKPLVKAPAKP 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5189g00006 676 FunFam PTI1-like tyrosine-protein kinase 3 434 660 - -
Pral5189g00006 676 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 27 653 - -
Pral5189g00006 676 SUPERFAMILY Protein kinase-like (PK-like) 343 646 IPR011009 -
Pral5189g00006 676 ProSiteProfiles LysM domain profile. 184 232 IPR018392 -
Pral5189g00006 676 Coils Coil 296 316 - -
Pral5189g00006 676 MobiDBLite consensus disorder prediction 656 676 - -
Pral5189g00006 676 Gene3D LysM domain 171 239 IPR036779 -
Pral5189g00006 676 SMART LysM_2 185 233 IPR018392 -
Pral5189g00006 676 Pfam LysM domain 186 233 IPR018392 -
Pral5189g00006 676 MobiDBLite consensus disorder prediction 242 265 - -
Pral5189g00006 676 Gene3D Phosphorylase Kinase; domain 1 341 433 - -
Pral5189g00006 676 ProSiteProfiles Protein kinase domain profile. 326 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5189g00006 676 MobiDBLite consensus disorder prediction 247 261 - -
Pral5189g00006 676 Pfam Protein tyrosine and serine/threonine kinase 407 646 IPR001245 GO:0004672|GO:0006468
Pral5189g00006 676 Gene3D Transferase(Phosphotransferase) domain 1 434 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5189g00006 Pral-Chr5189 23490 25699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5189g00006 43 671 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.030 6.90e-155 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral5189g00006 PK_Tyr_Ser-Thr 8.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5189g00006 - - gmx:100816082 926.776