Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5188g00001 ATGCCACAAGCTGATCCAATGAGACGTTTGCACATTTGTTTTCCGGTTCTTTTGTGGATTTTGTCTATTCCAAGTACCCATGAACTACAAGTTGCCCAGACCCAAGTCTTACTACAGACGAGGATGTATTTAGAGTATCCCGCCTCGTTGCAAAGTTGGGGAAGTTATAATGGGGACCTCTGTAACCTTTCTTCTTCTGCACATGTGAGCATTAAATGTCAAGATAACTCTGTATCTGAGCTTAAAATTAGGGGAGGCAAAACTGCGAAGTCCGATGAGTTCAAGGGGTTTGCAATTCCCAATCAAACGCTGTCGACGAACTTCTCTATTGATTCTTTTATCACTGCATTAACGAGGTTGACCAGCTTAAGGGTTCTTAGCCTGGTGTCCTTGGGAATCTGGGGTCATCTTCCGGATAAGATTCACCGATTATCTCTGCTCGAAGTTCTGGACTTAAGCTCGAATTTCTTATTCGGTTCTATCCCGCCGAAAATTTCCACAATGGTACAGCTCAATACATTGAAAATCGATGACAATTATTTCAACGATTCAATGCCCGACTGGTTCGATTCATTGTCGAATCTAAATGTCTTGAGTTTGAAAACCAACACCTTGCGGGGTTCATTCCCCTCATCATTGTGCAAAATTAAGAACCTCACCGATATTTCTTTGTCTCGCAATGAGCTATCTGGTAAATTACCTGATTTGAGCGCTCTCACTGGCCTACGTGTACTGAATTTAAGAGAAAACCGTTTAGGTTCTAAACTGCCATTGATGCCCGCAGGAGTGGTCACAGTTCTGCTAAGTAATAACTCATTTTCTGGCGAGATACCGAAGCAGTTCAGTGAATTGGGTCGGCTTCAACATCTAGATCTCTCGGCAAATCATCTGAGTGGAATACCTCCATCTTTCTTGTTCTCATTGCCAAGCATCAGCTATTTGAATTTGGGTAGCAATGTGCTGAGCGGGTCACTTCCAGATAAACTAAGTTGTAGCAGCAAACTTGGTTTTGTGGACATTTCTAGTAACAAATTAATTGGTGAACTTCCTTCTTGCTTGGCCAATACGTCCAATAGAAGAGTTGTCAAATATGATGGAAATTGTTTAACTCTCGATTCTCAAGATCAGCAGCCAGGTTCTTATTGTGAAGAATCCAATACGGAGAGGAAGAAATCGATGGCGCGGAAAATAACGTTAGCAGGGGCCATCCTTATTGGACTTGTTCTTGTCCTTGGGATTTCGGTATTAGGAGTTTTCTTTTGTAGAAAATGTCTGAGGAGAAGGGCAGCTAAGCATCATTTGTTGCCAAAGAACGCGCAAGATAATTCCACTACAGGGTTTTCATCTCAATTCCTCGCAAATGCCAGGTTCATTTCTCAGGCAGTGAAGCTAGGGGCACAAGCTACATCAATCTGTCGACCAATTTCAGTTGAAGAATTGAGGGAAGCCACAAGAGACTTTGACTTGTCAGCTTTTATTAGTGAAGGCTCCTTAGGAAAGCTATACAAAGGAAAACTAGAGAATGGATCCTACGTGGCAATACGATCTTTAGTTCTGTCAGAGAAATGCTCAATTCAAAATCTTAAAGCTCGGTTGGATTCATTCTCAAAGCTTCAACATCCAAATTTGGTCAGCCTATTGGGTTATTGTATTGATAATAGTGAACAAGATGATTCAACCACCTACAAACTTCATCTTGTATATGAGTATGTGCTCAATGGGAGTTACCGAGCCTATCTGTCAGAGTTTTCTCTAGAGAAGCCGCTCAAGTGGTCTGATAGATTGGCAATTTTAATTGGGGTTGCCAAGGCTGTGCACTTTTTACATACTGGGGTTATTCCAGGTTGTTTTAACAACCGATTGAAGACAGACAATATTTTGCTTGATGAGCATCGCTTTCCCAAGTTAAGCGACTATGGAATGTCCATCCTCGGAGAAGAGATTGAAAGGTTTGAGGCAAAGAGACAGGACTCAAAATCATGTGACCAACAAATCATTCTGCCCAACTGTTCTTGCAGCCAAAGGCAAGCGGACAAGGGGAAGCGTTTTTTTCTGAATGAGAAGGCATCCTTCGGAAGTCAAGATGGCAGAAGGAAAATTGTGGATCCCATAGTGTTGACATCTAGCTCTCAAGAGTCATTATCAATCGCAATAGCGATAACAACCAAATGCATATCTCCAGAACTTTCCTCTCGCCCCTCATTCGAGGATGTCCTGTGGAACTTACAGTATGCAGCTCAAGTGCAGGCCACAGCAGATGCAGACCAGAATTCAGAATCTACATCAGAATCTCAAGATTATAGGAGGGACAAATCCTGGGATTCAATTGGTTCACATCCTTCTCCGACAAAGCAGATTATTAAACCCCAGAATCATCGTAGGATCCATAAGTAA 2394 0.4223 MPQADPMRRLHICFPVLLWILSIPSTHELQVAQTQVLLQTRMYLEYPASLQSWGSYNGDLCNLSSSAHVSIKCQDNSVSELKIRGGKTAKSDEFKGFAIPNQTLSTNFSIDSFITALTRLTSLRVLSLVSLGIWGHLPDKIHRLSLLEVLDLSSNFLFGSIPPKISTMVQLNTLKIDDNYFNDSMPDWFDSLSNLNVLSLKTNTLRGSFPSSLCKIKNLTDISLSRNELSGKLPDLSALTGLRVLNLRENRLGSKLPLMPAGVVTVLLSNNSFSGEIPKQFSELGRLQHLDLSANHLSGIPPSFLFSLPSISYLNLGSNVLSGSLPDKLSCSSKLGFVDISSNKLIGELPSCLANTSNRRVVKYDGNCLTLDSQDQQPGSYCEESNTERKKSMARKITLAGAILIGLVLVLGISVLGVFFCRKCLRRRAAKHHLLPKNAQDNSTTGFSSQFLANARFISQAVKLGAQATSICRPISVEELREATRDFDLSAFISEGSLGKLYKGKLENGSYVAIRSLVLSEKCSIQNLKARLDSFSKLQHPNLVSLLGYCIDNSEQDDSTTYKLHLVYEYVLNGSYRAYLSEFSLEKPLKWSDRLAILIGVAKAVHFLHTGVIPGCFNNRLKTDNILLDEHRFPKLSDYGMSILGEEIERFEAKRQDSKSCDQQIILPNCSCSQRQADKGKRFFLNEKASFGSQDGRRKIVDPIVLTSSSQESLSIAIAITTKCISPELSSRPSFEDVLWNLQYAAQVQATADADQNSESTSESQDYRRDKSWDSIGSHPSPTKQIIKPQNHRRIHK 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5188g00001 797 Gene3D Transferase(Phosphotransferase) domain 1 572 673 - -
Pral5188g00001 797 ProSiteProfiles Protein kinase domain profile. 487 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5188g00001 797 ProSiteProfiles Leucine-rich repeat profile. 218 240 IPR001611 GO:0005515
Pral5188g00001 797 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Pral5188g00001 797 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 103 644 - -
Pral5188g00001 797 SUPERFAMILY L domain-like 106 370 - -
Pral5188g00001 797 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Pral5188g00001 797 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Pral5188g00001 797 SUPERFAMILY Protein kinase-like (PK-like) 469 744 IPR011009 -
Pral5188g00001 797 MobiDBLite consensus disorder prediction 751 797 - -
Pral5188g00001 797 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 30 261 - -
Pral5188g00001 797 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 571 761 - -
Pral5188g00001 797 Gene3D Ribonuclease Inhibitor 30 263 IPR032675 -
Pral5188g00001 797 SMART LRR_typ_2 239 262 IPR003591 -
Pral5188g00001 797 SMART LRR_typ_2 284 307 IPR003591 -
Pral5188g00001 797 SMART LRR_typ_2 308 332 IPR003591 -
Pral5188g00001 797 SMART LRR_typ_2 144 168 IPR003591 -
Pral5188g00001 797 Gene3D Ribonuclease Inhibitor 264 398 IPR032675 -
Pral5188g00001 797 Gene3D Phosphorylase Kinase; domain 1 450 570 - -
Pral5188g00001 797 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 263 387 - -
Pral5188g00001 797 Pfam Protein tyrosine and serine/threonine kinase 491 650 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5188g00001 Pral-Chr5188 21518 25909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5188g00001 7 690 Miscellaneous Gene Families AT5G14210 54.972 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pral5188g00001 PK_Tyr_Ser-Thr 4.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5188g00001 - - gmx:100813412 985.326