Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5187g00041 ATGGTTCTGGATGATCCCTTTTCTTTAACTTCGAAGAGGAGAAGGGTCACAGCGATTGATTCCATGGATGCTGAAGAAGCTAAGGCCAAGCTTGCAGCTATCAAGGAAAGGTTTGGACGAGATATCCGTGTATTTGAAACATCGCCAGTTTCTGCAGCACCAAATACTGCCACCAACAATGAAGAGACTGATGATTTCTATGAGTTCACTGCTGAAGATTATTATCGACTGTTAGCTACTAAAAAGGACGATAAATTCTTGAAGACTCGCAAAATCCGAGAAGCAGAAGAGGCAGCTCGTAGATCAAGAATAACCAAAACTGTGATTAGAGTTCGGTTTCCTGATAATCACACATTAGAGGCTGCCTTTCACCCTTCAGAAACGCTCCAGAGCCTAGTTGATCTCCTCACCAAAGTGATTGCACAACCAGAGCAGTCATTTTATATCTATACCACTCCACCAAAGAAGCTGATTAAAGACATGTCTCAAGATTTTTATACTGCTGGCTTTTGCCCTGGGGCCATTGTATACTTTTCATACGATCCTCCCCTAGGTGAAAGCTCGAACCATACGGGGCCTTTCCTACTAGAGGATATCGTGTCTTTGAAGGGGTTGGATGTTACTAATGATCAAGGCCAGCAGTCTGAACCTGCACAGTCTGCACCAGAACCTGTTGAAGCTTCACAAACCCCTGCTGTTCAAGAACGTAAGCCTGCTGATAAAAAGCCTGTCAAGCCGAAATGGTTAAAATTGTGA 756 0.4378 MVLDDPFSLTSKRRRVTAIDSMDAEEAKAKLAAIKERFGRDIRVFETSPVSAAPNTATNNEETDDFYEFTAEDYYRLLATKKDDKFLKTRKIREAEEAARRSRITKTVIRVRFPDNHTLEAAFHPSETLQSLVDLLTKVIAQPEQSFYIYTTPPKKLIKDMSQDFYTAGFCPGAIVYFSYDPPLGESSNHTGPFLLEDIVSLKGLDVTNDQGQQSEPAQSAPEPVEASQTPAVQERKPADKKPVKPKWLKL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5187g00041 251 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 251 IPR044232 GO:0032984|GO:0051117
Pral5187g00041 251 CDD UBX2_UBXN9 107 180 - -
Pral5187g00041 251 Gene3D - 96 178 - -
Pral5187g00041 251 MobiDBLite consensus disorder prediction 207 251 - -
Pral5187g00041 251 MobiDBLite consensus disorder prediction 235 251 - -
Pral5187g00041 251 Pfam UBX domain 105 172 IPR001012 GO:0005515
Pral5187g00041 251 SUPERFAMILY Ubiquitin-like 83 178 IPR029071 -
Pral5187g00041 251 ProSiteProfiles UBX domain profile. 102 178 IPR001012 GO:0005515
Pral5187g00041 251 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5187g00041 Pral-Chr5187 157608 161448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5187g00041 36 127 C2H2 Transcription Factor Family AT2G01650 34.375 1.77e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5187g00041 K15627 - gmx:100818386 351.673