Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5187g00033 ATGGGAAGGCAGCCTTGTTGTGATAAGATTGGTTTGAAACGAGGGCCCTGGACTATTGAGGAAGATCACAAGCTCATCAACTTCATCCTCAACAATGGCATCCATTGCTGGCGTATGGTTCCCAAGCTTGCAGGTCTGCTAAGATGTGGGAAGAGCTGCAGATTGAGATGGATTAATTATCTGAGGCCAGACCTCAAAAGAGGTGGCTTCACTGAAACGGAAGAGGATCAGATTATTCAGCTACACTCTCGTCTTGGTAACAGGTGGTCTAAGATTGCTGCACATTTTCCTGGGAGGACGGACAACGAAATCAAGAACCATTGGAACACAAGGATCAAGAAGAAGATGAAGCTGACTGGTCTGGACCCTGTGACACACGTGCCGATTGAGCAAATGCAAAAGCAAATCACTGATGATGATAATAAGAGACAGAGAAACCAGACAAGGCCGAGCTCCGAAGAAAATGTGGAGATCATCATGAAGCCCTCGGACAGTAGCGGCTGCACACAAGTTGTTTCAGAAGAACAAGGGAACAAGGAAGAACTAAACAAGGTGACCTGGGATGATACCTATGATCTTCCCAACAAAAACGACAAAATATGTTCCGACCTGGACTTCGGGTCACGGATGAACCCAGACAAAAACACCAGTACTACCAGCTCTTCATCTTTTTCTCTGGAAGATTCTAGCCACCTTTCCATGAGTGACTCTTCTTACCTGCAGGAGAACTCTTTAATGGAATGGGTTGATAGTATCAATATAGAATCCATTCTCCAATGGGACGCCTTCGATCCTCTGGATCAGGATCTTTCCTACTTTGGAAATAGATAA 831 0.4525 MGRQPCCDKIGLKRGPWTIEEDHKLINFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTETEEDQIIQLHSRLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKKMKLTGLDPVTHVPIEQMQKQITDDDNKRQRNQTRPSSEENVEIIMKPSDSSGCTQVVSEEQGNKEELNKVTWDDTYDLPNKNDKICSDLDFGSRMNPDKNTSTTSSSSFSLEDSSHLSMSDSSYLQENSLMEWVDSINIESILQWDAFDPLDQDLSYFGNR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5187g00033 276 MobiDBLite consensus disorder prediction 204 229 - -
Pral5187g00033 276 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral5187g00033 276 Gene3D - 69 116 - -
Pral5187g00033 276 CDD SANT 16 61 IPR001005 -
Pral5187g00033 276 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Pral5187g00033 276 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral5187g00033 276 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral5187g00033 276 Gene3D - 11 67 - -
Pral5187g00033 276 MobiDBLite consensus disorder prediction 151 176 - -
Pral5187g00033 276 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 221 - -
Pral5187g00033 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral5187g00033 276 MobiDBLite consensus disorder prediction 133 150 - -
Pral5187g00033 276 CDD SANT 70 110 IPR001005 -
Pral5187g00033 276 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral5187g00033 276 SMART sant 66 114 IPR001005 -
Pral5187g00033 276 SMART sant 13 63 IPR001005 -
Pral5187g00033 276 MobiDBLite consensus disorder prediction 132 180 - -
Pral5187g00033 276 FunFam MYB transcription factor 68 129 - -
Pral5187g00033 276 FunFam MYB transcription factor 11 67 - -
Pral5187g00033 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral5187g00033 276 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5187g00033 Pral-Chr5187 124839 125996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5187g00033 1 155 MYB Transcription Factor Family AT5G16600 65.663 5.80e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5187g00033 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5187g00033 K09422 - gmx:100783231 363.999