Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5187g00031 ATGAGTGTACAAGCCCAAATATTGGTCCCGCTTGTCCCGAGTCTGATGGGAAATAGTGATGATTGTCTGAATTCAAGCATTTTGTGTGATCGCAATTTTCAGATTGAGGCTGCGAATGGTATTCTCTCTCGGGAATCAGACATTTCCTCTGTTAATGTATCAAGTAGCAGTAATGTCATAAAAGCTGAGGGGGAGCCATCCATGGTACCAAAAATTGGCTTGGAGTTTGATTCAGAAGACCATGCTTACAAGTGTTATAGCAGGCACGCTGTTTTGAAAGGCTTCAGCATAAGAAAAGATTTTGTCAACAAAAGTAGGGTGAATGGTGCTGTGGTATCTAGAAGATACACTTGCTACAGACAGGGCTATAGGCCTAATAAACATAATGCCGGTGTGAGGAAATCCCAGCCAGAGACAAGGACTGGATGCCTGGCACATATGACTATTGCTCGTCAGCCTAATGGCAAGTTTCGTGTCACTCATTTTGAAGCAGAGCACAATCATGAGTTTGCAACACCCTGTACTGCTCATATGTTACCATCGCAGAGAAGATTGAGTTTTGCTCAAGCAGTTGAATCTAACGGGTCTAATAATTCTGTGTTGGATGGGGTACCAAGAGTTGGAATGGGATTTGATTCAGAAGATCGTGCATATGAGTTTTATAATACATATGCTGGACGTGTAGGTTTCAGTGTACGGAAGGATTATGTAAATAGAAGTAAAATTGATGGTGCTGTAGCCTCTAGAAGGTTCACATGCTTTCGAGAAGGTTTTCGGCAGAAAGACAAACGTGATATGAATGTGAAGAGGCCTCGAAAAGAAACTAGAATTGGATGTTTAGCACAACTGGTAATTTCTCGTCAACCGGATGGTAGATATTGTGTAACTCATTTTGAAGAAAAGCATAATCATGAGCTCGTTGCTGCTTGTAGAGTTCACATGTTACGATCACAGAAGAGAATAGCCACGATTCAAGCCATTAAGAACAACATGGTAGATGCTTCCGTGGTGCTTCCTGAGTCTGGATCAAATTGCAAGGCTATTGAAGGTTTAGATGACCGGGGTTGTGACCCCATAGAATATGGAAATAAATTGCCCTTAAAGTGCACAAGAGAAATGAAAGAGGGAGAAGTTGAAAAGCTAAAGCATCACTTTCGAATCAAGCGATCAAAAAATCCTTCCTTCTTTTATGCTTTTCAACTTGATTCTGATGATCAAATAACTAATATGTTTTGGGCTGACACAAAGATGGTAGGAGACTACTGTGATTTTGGTGATGTTGTTTGTTTTGATTGTAGTTACAGATTTTATGGAGACTCCCGCCCTTTTGCTCCATTTCTTGGTGTCAATAATCACAAGCAAATGCTTATCTTTGGGGCTGCGCTTCTATATGATGAAACGATTGAATCTTTCAAGTGGCTATTTCAAGTCTTCTTGGAGGCGATGTCCAGAAGACAGCCAAAGACAATTCTTATAGATCAAGATGATATAATAGCTGAAGCAGTGTCTTCTGTCTTGCGTGAAACTAACTGCCAAATCTGTGCATGGCATGTGTACCAAAATGCACTAAATCAACTTGGTCACATGTTTATGGGATCTAATTCTTTTGTTAATGATTTGAGAAGCTGCTTTTTCGATCACGAGGAGGAGGATGACTTTGTTAATGCATGGAATGATTTCCTGGGCAGGTATAATCTTTGGGAAAATGAATGGTTGTGTCGAATATATGAAAGTAGAGACAACTGGGCCTTAGCATATGGAAGGCAAAATTTCTGTGCTGACATAACGAGTGTGCTTTGGAGAGAAAATCTTACTGGTGGCTTGAAGAAGCAGCTAACGAATGATACGGATGTGCTATCATTTGTCAAGTATCTTGGGAAGGTGGTGGCTGATTGGCACTATAAGGAATTAGAAGCCAATTATGATATGAGCCAGCGTATGCCAGCACTGATGGGAGATGTGATTCTTTTGAAGCATGCAAGAGATCCATATACACCTAAGATATTTGAGTTATTTCAGAAGGAATATGAAACTTGTTTAAATCTAGTGATAAAGCATTGCAGTGAAAGTGGATCATTGTACAGGTATAAAGTTAGCATATATGAGCACGTACGAGAGTATACCGTTACCTTTGATTCATCTAATGAGACTGTCAGCTGCACCTGTATGAAATTTGAGTCGATGGGAGTCCTATGCAGCCATGCATTAAAAGTTCTTGATTACAGGAATATAAGGATACTTCCATCATTGTACATCTTAAAGAGATGGACAAAAGATGCGAGACTAGATTTCTGGAAGCAAACTTGA 2307 0.401 MSVQAQILVPLVPSLMGNSDDCLNSSILCDRNFQIEAANGILSRESDISSVNVSSSSNVIKAEGEPSMVPKIGLEFDSEDHAYKCYSRHAVLKGFSIRKDFVNKSRVNGAVVSRRYTCYRQGYRPNKHNAGVRKSQPETRTGCLAHMTIARQPNGKFRVTHFEAEHNHEFATPCTAHMLPSQRRLSFAQAVESNGSNNSVLDGVPRVGMGFDSEDRAYEFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRDMNVKRPRKETRIGCLAQLVISRQPDGRYCVTHFEEKHNHELVAACRVHMLRSQKRIATIQAIKNNMVDASVVLPESGSNCKAIEGLDDRGCDPIEYGNKLPLKCTREMKEGEVEKLKHHFRIKRSKNPSFFYAFQLDSDDQITNMFWADTKMVGDYCDFGDVVCFDCSYRFYGDSRPFAPFLGVNNHKQMLIFGAALLYDETIESFKWLFQVFLEAMSRRQPKTILIDQDDIIAEAVSSVLRETNCQICAWHVYQNALNQLGHMFMGSNSFVNDLRSCFFDHEEEDDFVNAWNDFLGRYNLWENEWLCRIYESRDNWALAYGRQNFCADITSVLWRENLTGGLKKQLTNDTDVLSFVKYLGKVVADWHYKELEANYDMSQRMPALMGDVILLKHARDPYTPKIFELFQKEYETCLNLVIKHCSESGSLYRYKVSIYEHVREYTVTFDSSNETVSCTCMKFESMGVLCSHALKVLDYRNIRILPSLYILKRWTKDARLDFWKQT 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5187g00031 768 SMART 26again6 718 745 IPR006564 GO:0008270
Pral5187g00031 768 ProSiteProfiles Zinc finger SWIM-type profile. 707 743 IPR007527 GO:0008270
Pral5187g00031 768 Pfam FAR1 DNA-binding domain 219 307 IPR004330 -
Pral5187g00031 768 Pfam FAR1 DNA-binding domain 86 171 IPR004330 -
Pral5187g00031 768 Pfam SWIM zinc finger 707 742 IPR007527 GO:0008270
Pral5187g00031 768 Pfam MULE transposase domain 427 521 IPR018289 -
Pral5187g00031 768 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 54 189 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5187g00031 Pral-Chr5187 114830 118324 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral5187g00031 MULE 1.3e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5187g00031 K17604 - gmx:102659753 1113.21