Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5187g00023 ATGTGTCACACCAGCACCCCTCCTCCTTCTTCCGATCTCAGCCCCAGTAACTCCAACTCCATTCCCACAACCAGAGATTCTCTGAGTCGTCTCGCAGCACCTCGCCGTAAGAACAGAACAAAAACCAGGAAGCCCAAGTTCCTGAGTCTTCGGCTCCAGCTCTCATCAAATCAGTCCGATCCAATGGCACATCATCAACAGCTCAACCTCTTCCCCTTACACCCTGAAAACTTGATCCATGACAGAGATGTCATGCACGACGACGGCAACGTCGCTTTGCTCTTCACTTCTTATGGCCCCGCCACCCTCAACGGCCTTCTGGAACAGGACTCCACAACCACAACCACCACCACCACTAATACCACCGTTTCGGAGGAGGATTCTGTGTCGCCCCAGTGTTGGACGGCGTACCCCTTCCACAAGGAGAACGGGAGCGCGCTGGTACGTAAGGCCATGAAGAGGAGGAGCGAGGAGGACGGAAGGGAGGAGAGGTGGGTGTGTTACTCGGAGGTCACAAGTTATTGCAGCGCCAATACGACGGAGAGCACCGCCGCCCCCTCGACGTCGTCCGGGTTGCTGTCATTGAAGCTGAATTATGAGGGCATATTAAATGCCTGGTCTGACAAAGGTCCTCTTTATGTTCCGGCCGAGACCCCACACGCTGTTCCCGACTTCCTCGATCATGTCCTTCCACACCATCCGCCCCACGTTGTATGGGGGCATAGCAGTGTGGTGGAGAAGGCGTGGGAAGAGAGCGAGAAGAAGGAGAAACGGAAGGAAGAAATGGGACAAAGGGAGGCAAGCGTGTTAAGATATAAAGAGAAGAGGCGAAGCAGGCTCTTCTCCAAGCGAATCCGCTACGAGGTTCGTAAGCTCAATGCTGAACAGCGCCCCAGGATGAAGGGACGATTTGTGAAGAGGGACTGA 927 0.5469 MCHTSTPPPSSDLSPSNSNSIPTTRDSLSRLAAPRRKNRTKTRKPKFLSLRLQLSSNQSDPMAHHQQLNLFPLHPENLIHDRDVMHDDGNVALLFTSYGPATLNGLLEQDSTTTTTTTTNTTVSEEDSVSPQCWTAYPFHKENGSALVRKAMKRRSEEDGREERWVCYSEVTSYCSANTTESTAAPSTSSGLLSLKLNYEGILNAWSDKGPLYVPAETPHAVPDFLDHVLPHHPPHVVWGHSSVVEKAWEESEKKEKRKEEMGQREASVLRYKEKRRSRLFSKRIRYEVRKLNAEQRPRMKGRFVKRD 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5187g00023 308 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 308 - -
Pral5187g00023 308 MobiDBLite consensus disorder prediction 1 46 - -
Pral5187g00023 308 Pfam CCT motif 265 307 IPR010402 GO:0005515
Pral5187g00023 308 MobiDBLite consensus disorder prediction 1 27 - -
Pral5187g00023 308 ProSiteProfiles CCT domain profile. 265 307 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5187g00023 Pral-Chr5187 87255 89717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5187g00023 193 307 C2C2-CO-like Transcription Factor Family AT1G73870 45.763 1.73e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5187g00023 CCT 9.4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5187g00023 - - zju:107415240 224.557