Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5187g00001 ATGGCTCCATATATGAAGTCTCTGCTTCTGGTGGCAGCAATAGTAGTTGCAATGTCTGAAGGTGGAGGCGTGGAAGATAAGATTTGCTCCCCTAACGGTGCAGATCCAGAATGCAATGGTTGTAATGGTGGGAGGCGGAAAGGCATGGATTATAAAAGCTCCAAAGTAACAGTGAAAATCCAGAATGGGCTGTCTCAAAATCAGGACTTGACGCTTCATTGCAAATCCAAGGACGATGATCTCGGAGAACACACCCTACAAAATAAAGCAAGTTACAAGTTCAGTTTGAGGCCCAGGTTTTTTATTCACTCGACACTGTTTTTCTGCAGCTTCTGGTGGCCTTCAAACACTTCGCTTCACTACTTCGACATATACGTAGAGGACCGAGACTGGTGGTGCAATCTCTGTGCTTGGACTATATCCGAATCAGGAGCTTGTATCTACGATGAACTCACTCGCCAAACTGATTGCTATCCTTGGAATTCTGCCTAA 492 0.4512 MAPYMKSLLLVAAIVVAMSEGGGVEDKICSPNGADPECNGCNGGRRKGMDYKSSKVTVKIQNGLSQNQDLTLHCKSKDDDLGEHTLQNKASYKFSLRPRFFIHSTLFFCSFWWPSNTSLHYFDIYVEDRDWWCNLCAWTISESGACIYDELTRQTDCYPWNSA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5187g00001 163 Pfam Plant self-incompatibility protein S1 57 160 IPR010264 -
Pral5187g00001 163 PANTHER - 53 150 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5187g00001 Pral-Chr5187 230 2255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5187g00001 51 162 Carbohydrate Esterase AT3G16970 38.983 2.93e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5187g00001 - - pcin:129302566 182.956