Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5183g00027 ATGTCGATGGAGTCACCTGTCAATGGAGGCGAGTCTATATCAGAGGTTCAGAATTCGGTTTCTGCGCAAGATCACGACTCTCCTTCGACATCTGAAACGCCATCTTCTTCTCGACCTCCCTTAAGAGCATCATCAAGAAATCAGGCGGCTCCTTCCACGACCTATCACACTGGTCATCCTAATTACGGAATTAAGATTCACCAAAAGCATCCTTACCAGGAAATCAACCATGTGCAGCATCAAGAACTGCCAAATACGGCCAAGCAACATCACAATTCTAGTGGAAAATCAGGAGAAATTAGTTCAGGGAAGAATATATCTACGATAGAAACAAAGAATCATGATGCAAAAGGCATATCAGCCTCATCTAAAGGAGTTGGTGATCAAACGAAGAGTTGCTCTCGGTCAGATGTAACTTTTTGTGCAAGTCCTCAGAATAGCTTCTATTCTGCAGCTACCTATTCAGAAGCCAAACAAAGTTTCGTCAATACTGAAGTGAGTGAGTGTGTTAGTGTGGATAAGTCAGGTGAAAGTGGTGAAGCCACTAACTCTTGTGACTTCAATGAGAGCAGGAAGACCAGTATATGTAGAGGGAGTACTGGGAGCGATGTGAGTGATGAGAGTAGCACCAGTAGTTTGAGCAGTGCGTTGTATAAACCTCACAAGGCTAATGATATAAGATGGGAAGCGATTCAAGCCGTGCGAGCTCGCGATGGGGTGCTGGAAATGAGGCATTTCAGATTGTTGAAGCAATTGGGATGTGGAGACATAGGAAGTGTGCATCTTGCAGAGTTAAGCGGCACAAGGACATGTTTTGCAATGAAGATAATGAACAAAACGGAGCTGGCTAGTAGGAAGAAGCTTCTGAGGGCTCAGACAGAAAGAGAGATCTTGCAGTCTCTGGATCACCCTTTTTTGCCCACATTATATACACATTTTGAGACAGAGACGTTCTCTTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCGCTGAGGCAAAGACAGCCTAGGAAGTATTTCTCGGAGCATGCTGCCAGGTTTTATGTAGCAGAAGTTCTTCTTGCTTTGGAATACCTTCACATGCTTGGGATCATCTACAGAGACCTCAAACCAGAGAACGTGTTGGTGCGTGAAGACGGTCACATAATGCTCTCTGACTTCGACCTCTCTCTGCGTTGCGCCGTGAGTCCGACTCTCGTAAAATCGTCAAACTCAACCCTGGACGGAAGAACTTCGGGATACTGCATTCAGCCGACCTGCATCGAACCGACCTGCGTGATGCAGCCAGATTGCATCCAGCCCTCCTGTTTCACTCCTCGATTTCTATCCGGCAAATCCAAGAAAGACAAAAAGCCCAAGCCAAAGAACGAAACGCCACACCAGGTGACTCCTCTCCCGGAGCTCATCGCCGAACCCACAAACGCCCGTTCCATGTCCTTCGTGGGTACACACGAATACTTAGCACCCGAAATCATCAAAGGCGAAGGCCACGGAAGTGCAGTAGACTGGTGGACGTTCGGGATATTCTTGTACGAGCTTTTGTTCGGAAGAACGCCGTTCAAGGGGTCGGCTAACAGAGCGACTCTGTTCAACGTGGTGGGGCAGCCACTGAGGTTTCCAGAATCACCCACCGTTAGCTTCGCTGCTAGGGATTTGATCAGAGGATTGCTCGTGAAAGAGCCTCAACATCGTCTGGCTTATAGACGAGGAGCCACGGAGATCAAACAGCACCCGTTCTTTCAGAACGTGAATTGGGCACTGATACGGTGTGCAAACCCGCCGGAGGTTCCAAGGATAGTGGCCCTGAAAGAGATGGCGGCTCAGAAAGTGCCCGGCGTTAAGCCTGCCGGTAACTATTTAGATATTGATTTCTTTTGA 1887 0.4801 MSMESPVNGGESISEVQNSVSAQDHDSPSTSETPSSSRPPLRASSRNQAAPSTTYHTGHPNYGIKIHQKHPYQEINHVQHQELPNTAKQHHNSSGKSGEISSGKNISTIETKNHDAKGISASSKGVGDQTKSCSRSDVTFCASPQNSFYSAATYSEAKQSFVNTEVSECVSVDKSGESGEATNSCDFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAVRARDGVLEMRHFRLLKQLGCGDIGSVHLAELSGTRTCFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLDGRTSGYCIQPTCIEPTCVMQPDCIQPSCFTPRFLSGKSKKDKKPKPKNETPHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRIVALKEMAAQKVPGVKPAGNYLDIDFF 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5183g00027 628 MobiDBLite consensus disorder prediction 85 106 - -
Pral5183g00027 628 MobiDBLite consensus disorder prediction 113 132 - -
Pral5183g00027 628 FunFam Serine/threonine-protein kinase D6PK-like 244 329 - -
Pral5183g00027 628 MobiDBLite consensus disorder prediction 446 465 - -
Pral5183g00027 628 Pfam Protein kinase domain 247 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5183g00027 628 Pfam Protein kinase domain 480 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5183g00027 628 SUPERFAMILY Protein kinase-like (PK-like) 224 601 IPR011009 -
Pral5183g00027 628 CDD STKc_phototropin_like 244 601 - -
Pral5183g00027 628 FunFam serine/threonine-protein kinase D6PK-like 478 601 - -
Pral5183g00027 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Pral5183g00027 628 MobiDBLite consensus disorder prediction 1 59 - -
Pral5183g00027 628 MobiDBLite consensus disorder prediction 1 64 - -
Pral5183g00027 628 PANTHER FLIPPASE KINASE 1-RELATED 81 605 - -
Pral5183g00027 628 MobiDBLite consensus disorder prediction 192 211 - -
Pral5183g00027 628 SMART serkin_6 246 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5183g00027 628 Gene3D Phosphorylase Kinase; domain 1 245 329 - -
Pral5183g00027 628 FunFam serine/threonine-protein kinase D6PK-like 330 397 - -
Pral5183g00027 628 ProSiteProfiles Protein kinase domain profile. 246 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5183g00027 628 Gene3D Transferase(Phosphotransferase) domain 1 330 428 - -
Pral5183g00027 628 Gene3D Transferase(Phosphotransferase) domain 1 477 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5183g00027 Pral-Chr5183 171439 175516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5183g00027 154 628 AGC Kinase Gene Family AT5G47750 71.545 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral5183g00027 Pkinase 6.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5183g00027 K08286 - gmx:100802402 954.51