Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5182g00020 ATGAATACGACACCGTTCATGGATAAGCAGATTATGGATCTAACCCAAGGATCGTCTTCGAGCAAGGATTTCATCGACCTGATGAGCCGTCCTAAGGAGGAAGAAAAGGCAGACGCAGAAGGTGAAGCTCGCCGTGGCAGCCACCACCAAATCGGTGGTAATGGGATTAAGGAGGGTATCATTCCCAGTTACGATTTCCAGCCGATTCGCCCACTCGGAGCTTCGACCCAGTCTTCCAATCACGATTCCAGCCCTAATATGGGAGGGATTTCGAGGTCTTGGAATTCTGACTCCAAGTCTAACTTTTCCACCCCAATCCTTAGAAATTATAATTCTCTGGACTCTCTTGAACCTGCAAAAGTCACAGTGGAAAAGGATCAAAATGCCTTTGATGCTGCAATACTGTCTGAGATAGATCAAACCATGAAGAAGCATATGGAGAATTTGCTTCATGTGCTGGAAGGCATCGGTGCAAGATTAACACAACTAGAAAGCAGAACCAACCATCTTGAAGATTCTGTGGATGAGTTGAAGGTGTCTGTTGGAAACAACCATGGTAGCACTGATGGGAAAATGAGACAGCTCGAGAATATCCTTAGAGAGGTGCAAATGGGTGTACAAGTTTTAAAGGATAAGCAAGATGTGATGGGAGCTCAACTGCAGCTGGCAAAGCTACAAGTGTCCAAGGTGGACCAACATTCAGAAACTCAGGCTAGTGTAACTACAGATCCTGTACAGCAAACTGCATCGGCTTCTCAGCAATTGCAACAACAGCTTCCTTCCCCTGTTAATCTTCCACAATCAGTTGCTGCGGTCCCTCACCCTAATGCTCCTCCTCAACCTCTGTCCCAACAGGGTGTGCCACCTCCAGTTCAACTTCCTAATCAATTTCCTCAGGCCCAAATTCCTTCTGTTCCTCAGCGAGAACCTTACTTCCAACCACCACCTCAATCTCACGAGACCCCAAATCAGCAATACCAATTGCCTTTATCTCAACAGCCCCTTCCTCCTCCTGGGGCACCTCCACAACAGCAATATCAACAAAACCCTCAACCTCAGTACCCTCAGCCTGTACCTCATCCACCTCAACAGCAGCCATCACCTTCTCCTGTCAGTCCCCCGCCGCAACTCCCATCTTCAATGGGTCACCATGTGGAGGATGCGTCTTATATTCCTCCTCAGAATTATCCACCCAATGTCCGCCAACCACCATCCCAGCCACCACCCAGTGGGCCACCTCCTGCCCAGCAATTCTATGGACCGCCATCCCATGCCTTTGAACCACTCTCTAGTAGATCTGGTTCAGGTTTTTCTTCTGGGTATAGTGCACCATCTCTACCTGCTGAGCCATATCATTACGGTGGATCGCCTCAGTATGGTGGCACTTCAGGGCTAAAACCACAGCTGCCTCCTTCAGCTGTGGCTCCTCCAAGTGGGGGAAGTGGTTACCCTCAGCTTCCTACTGCTCGTGTGCTGCCCCATGCATTGCCTACAGCTTCAGCGGCAAGTAGCAGTTCTGGATCTGGTGGAAGTGGAAATCGGGTCCCCATAGATGATGTGGTTGACAAAGTGGCAAGTATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTTCGAAAGCTAACAGAGAATGGTCAAGCAGTTGACCTCAATGTAGTGCTGGATAAGCTTATGAACGAAAGTGATATCCAGCCAAGAGGGTGGTATGGTCGGTAG 1716 0.4918 MNTTPFMDKQIMDLTQGSSSSKDFIDLMSRPKEEEKADAEGEARRGSHHQIGGNGIKEGIIPSYDFQPIRPLGASTQSSNHDSSPNMGGISRSWNSDSKSNFSTPILRNYNSLDSLEPAKVTVEKDQNAFDAAILSEIDQTMKKHMENLLHVLEGIGARLTQLESRTNHLEDSVDELKVSVGNNHGSTDGKMRQLENILREVQMGVQVLKDKQDVMGAQLQLAKLQVSKVDQHSETQASVTTDPVQQTASASQQLQQQLPSPVNLPQSVAAVPHPNAPPQPLSQQGVPPPVQLPNQFPQAQIPSVPQREPYFQPPPQSHETPNQQYQLPLSQQPLPPPGAPPQQQYQQNPQPQYPQPVPHPPQQQPSPSPVSPPPQLPSSMGHHVEDASYIPPQNYPPNVRQPPSQPPPSGPPPAQQFYGPPSHAFEPLSSRSGSGFSSGYSAPSLPAEPYHYGGSPQYGGTSGLKPQLPPSAVAPPSGGSGYPQLPTARVLPHALPTASAASSSSGSGGSGNRVPIDDVVDKVASMGFPRDHVRATVRKLTENGQAVDLNVVLDKLMNESDIQPRGWYGR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5182g00020 571 MobiDBLite consensus disorder prediction 331 345 - -
Pral5182g00020 571 Pfam UBA-like domain (DUF1421) 517 561 IPR010820 -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 70 97 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 26 47 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 235 265 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 428 442 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 396 419 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 498 512 - -
Pral5182g00020 571 PRINTS Proline rich extensin signature 274 290 - -
Pral5182g00020 571 PRINTS Proline rich extensin signature 332 353 - -
Pral5182g00020 571 PRINTS Proline rich extensin signature 393 418 - -
Pral5182g00020 571 PRINTS Proline rich extensin signature 303 315 - -
Pral5182g00020 571 PRINTS Proline rich extensin signature 355 371 - -
Pral5182g00020 571 Coils Coil 160 180 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 1 97 - -
Pral5182g00020 571 Coils Coil 192 212 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 352 377 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 235 517 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 272 296 - -
Pral5182g00020 571 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 569 - -
Pral5182g00020 571 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5182g00020 Pral-Chr5182 109961 113942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5182g00020 6 312 Trihelix Transcription Factor Family AT5G14540 44.479 4.28e-67 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5182g00020 - - qsa:O6P43_008925 637.876