Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5182g00004 ATGCAGTCTCTCTCCCAGACCATCACCTCTCAGAACTGGGCCTCTCACTCTCTTAATCTCTCTTCCCTTCCCATCTTCGGCTTCGCTCAGTGCTTCCGTGACCTTTCCCACACCGATTGCCTTCTCTGCTACGCTGCCAGCCGCACCAAGCTCCCTCGCTGTCTCCCCTCTCTCTCGGCCCGCATCTACCTCGACGGCTGCTTCCTTCGCTACGATAACTACAGTTTCTACTCGGAAGCCATTGATCCTGTTAGGGACACTCTGAACTGTAGCTCCTCATATGGTGTGGTGGAGGATGAAAGAGGTGAGAGGCGGGAATTTGAGAAGAGTGTCGGCGACGTGCTTGATAATGTGGTGAGGGTTTCGCTGGGAGAGGGATTAGGGTTTGGTGTGGGAGAGGTTGGGGGAGTTTATGCCTTGGCTCAGTGTTGGAAGACATTGCGAAGTGATGAATGTGGTATTTGCTTGAGGAAAGCAGCAAGGGATGTGAGAGGGTGCTTGCCTAAGAGGGAAGGAAGGGCATTGAATGCTGGTTGCTATTTGAGGTACTCAACTCGCAAGTTCTATAACGAAGCTGGTGAAGAAGAAAAGGGTCAAAAGGGGTCATTTAGGAGGGGAGCGATCATAGCGACAGTGTTATCTGCGGCTGCAGTTGTGATGCTGTTTCTCTCTGCATTTTATGTTGTCTTGTCAAGATTATCAAAGAGGAAGAAAGATAAAGAAAGCAATTATCTTGGTCAGATTTCCATTTCCATAAACAAGTCGAGTTTGAATTTCAAATACGAAACTCTGGAGAAGGCCACGGATTATTTCAACTCTTCAAGAAAAATTGGGCAAGGAGGGGCTGGGTCTGTGTTCAAAGGGACTCTTGCAAACGGGAGAGTGGTGGCTGTCAAGAGATTAGTGTTCAATACCAGGCAATGGGTTGACGACTTCTTTAACGAAGTGAATTTGATTAGCGGAATTGGGCACAAGAATCTCGTCAAACTCCTGGGCTGTAGCATTGAAGGCCCCGAAAGCCTCCTTGTCTACGAGTACCTACCCAACAAGAGCTTGGATCAATTCATTTTTGAAAAGAGCAAAAGTCAGATTCTAAATTGGAAGCAGCGTTTAAATATAATAATTGGAATAGCAGAGGGGCTTGCGTATCTTCATGCAGGATCTAATCTAAGAATAATCCATAGAGACATCAAAAGCAGCAACATTCTTCTGGACGAGAATCTCACTCCTAAGATTGCAGACTTCGGCCTGGCCCGATGTTTTGCTGCCGACAAAACGCATCTTAGCACGGGCATCGCCGGAACACTAGGATACATGGCGCCTGAATATCTTATTCGAGGACAACTAACAGATAAAGCAGATGTGTATAGCTTTGGAGTACTTGTTCTGGAAATTCTATGCGGCCGAAGGAACAACGTCTTCAGAGAAGATTCTGGCTCCCTTTTACAAACAGTTTGGAAACTCTATCGATCAAATCGATTACATGAAGCTGTGGATCCATGCTTAGGAGATGATTTTGCAGCAGCAGAGCTGTCAAGGGTGCTTCACATAGGGCTACTATGCACACAAGCTTCGGCTTCCCTGAGGCCAACCATGGAAGAAGTTGTGGAGCTGTTAAGTAACTCAAATGTGGATGTTTCTGTACCAAATCAACCCCCATTTTTGAGTACTGGCACTGGGTTGCCAAACTCAGAGAGCTCCATTAGGTCTTACAGCACAAACAGTTTGTTTCAAATGCATTGA 1743 0.4659 MQSLSQTITSQNWASHSLNLSSLPIFGFAQCFRDLSHTDCLLCYAASRTKLPRCLPSLSARIYLDGCFLRYDNYSFYSEAIDPVRDTLNCSSSYGVVEDERGERREFEKSVGDVLDNVVRVSLGEGLGFGVGEVGGVYALAQCWKTLRSDECGICLRKAARDVRGCLPKREGRALNAGCYLRYSTRKFYNEAGEEEKGQKGSFRRGAIIATVLSAAAVVMLFLSAFYVVLSRLSKRKKDKESNYLGQISISINKSSLNFKYETLEKATDYFNSSRKIGQGGAGSVFKGTLANGRVVAVKRLVFNTRQWVDDFFNEVNLISGIGHKNLVKLLGCSIEGPESLLVYEYLPNKSLDQFIFEKSKSQILNWKQRLNIIIGIAEGLAYLHAGSNLRIIHRDIKSSNILLDENLTPKIADFGLARCFAADKTHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEILCGRRNNVFREDSGSLLQTVWKLYRSNRLHEAVDPCLGDDFAAAELSRVLHIGLLCTQASASLRPTMEEVVELLSNSNVDVSVPNQPPFLSTGTGLPNSESSIRSYSTNSLFQMH 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5182g00004 580 Gene3D Transferase(Phosphotransferase) domain 1 347 550 - -
Pral5182g00004 580 Pfam Protein kinase domain 272 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5182g00004 580 FunFam Cysteine-rich receptor-like protein kinase 42 1 76 - -
Pral5182g00004 580 Pfam Salt stress response/antifungal 21 74 IPR002902 -
Pral5182g00004 580 Pfam Salt stress response/antifungal 103 185 IPR002902 -
Pral5182g00004 580 Gene3D - 1 76 IPR038408 -
Pral5182g00004 580 Gene3D - 95 188 IPR038408 -
Pral5182g00004 580 ProSiteProfiles Gnk2-homologous domain profile. 89 188 IPR002902 -
Pral5182g00004 580 ProSiteProfiles Gnk2-homologous domain profile. 1 76 IPR002902 -
Pral5182g00004 580 SMART serkin_6 271 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5182g00004 580 Gene3D Phosphorylase Kinase; domain 1 230 346 - -
Pral5182g00004 580 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 28 562 - -
Pral5182g00004 580 MobiDBLite consensus disorder prediction 555 580 - -
Pral5182g00004 580 FunFam Cysteine-rich receptor-like protein kinase 3 91 188 - -
Pral5182g00004 580 FunFam Cysteine-rich receptor-like protein kinase 2 234 346 - -
Pral5182g00004 580 CDD STKc_IRAK 277 539 - -
Pral5182g00004 580 FunFam Cysteine-rich receptor-like protein kinase 2 347 547 - -
Pral5182g00004 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Pral5182g00004 580 ProSiteProfiles Protein kinase domain profile. 271 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5182g00004 580 SUPERFAMILY Protein kinase-like (PK-like) 256 567 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5182g00004 Pral-Chr5182 30164 33208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5182g00004 1 436 Receptor kinase-like Gene Family AT5G40380 59.174 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5182g00004 Pkinase 9.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5182g00004 - - gmx:100790404 865.914