Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5181g00018 ATGCTGAATATTTCGGTGTCACTGTCTTCTATGACTCCAACAATATCACCTTCGTCTCGAAACGCCATAACTAAGCTTCCTCAACTCTCGCACGCATTGTCTTCTTTAGCCACCACAAATTCCCATTCTTTCTCTGGACTTCCATGTGGGAAAGCCTCTTGCCCACCTTCTTATTTGTGTGTTGGAGCTCAAAAATCAGCTTCATTTCTCGTTCCAAGTCGAAAAAATGTAACCTTTAAGGTCACAGCTGCTTTGGTTCCTGAAGCTAACAGTCATGAGCCCAGCAAACCCAATACTTTGATTCGGACGCTACAGCTTGGGGCCATGTTCGGAGTTTGGTATGTTTTGAACATTTACTTCAACGTCTACAACAAACAGGTTCTAAAAGTATATCCATTTCCAGCGACAGTGACAGCATTTCAGTTTGGTTACACTGCGCTGATGATTACTTTGATCTGGACTTTTAATCTCTACCCCAAACCAAAGATTAGTCGGGCACAGCTTGTAGCAATCTTTCCGCTGGCTGTGGCTCACACAGTAGGTAACCTTTTGACCAACATTAGCTTTGGAAAGGTTGCTGTGTCTTTCACTCACACAATCAAAGCTTTGGAGCCTCTCTTTACAGTTGTTCTTTCTTCTCTTTTTCTTGGGGAGCAACCTACTTTTAGGGTGGTTTCTTCCCTCGTGCCAATAGTTGGTGGAGTGGCACTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGTTTCGGTAGTGCTATGGCATCTAACCTTATCAACCAATCACGGAATGTGTTGAGCAAAAAACTTATGGTCAATGAAGAGGAAAGCTTGGACAACATAAACCTCTACTCAGTTATATCAATAATTTCCTTCATTCTGGCAATCCCATTTGCCATTTCTATGGAAGGGTTTAAGTTTACACCTTCGTTCCTGCAATCTGCTGCAAGCCAAGGATTGAATATTAGAGAGCTATGTGTGAAATTGGTGCTGGCTGGGTTCTGCTTCCATGCGTACCAACAGGTTTCTTATGGGATATTACAGATGGTATCCCCAGTGACGCACTCAGTCGGGAATTGTGTGAAGCGCGTGGTTGTCATAGCATCCTCAATTATCTTCTTTCAGACTCCTGTCTCGCTGGCCAACACCATTGGAACTGCTGTGGCACTTGGTGGCGTATTCTTCTATTCGAGGACTAAGCGGATAAAGCCGAAGGCGGCATAG 1224 0.4404 MLNISVSLSSMTPTISPSSRNAITKLPQLSHALSSLATTNSHSFSGLPCGKASCPPSYLCVGAQKSASFLVPSRKNVTFKVTAALVPEANSHEPSKPNTLIRTLQLGAMFGVWYVLNIYFNVYNKQVLKVYPFPATVTAFQFGYTALMITLIWTFNLYPKPKISRAQLVAIFPLAVAHTVGNLLTNISFGKVAVSFTHTIKALEPLFTVVLSSLFLGEQPTFRVVSSLVPIVGGVALASMTEVSFNWIGFGSAMASNLINQSRNVLSKKLMVNEEESLDNINLYSVISIISFILAIPFAISMEGFKFTPSFLQSAASQGLNIRELCVKLVLAGFCFHAYQQVSYGILQMVSPVTHSVGNCVKRVVVIASSIIFFQTPVSLANTIGTAVALGGVFFYSRTKRIKPKAA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5181g00018 407 PANTHER SOLUTE CARRIER FAMILY 35 105 400 - -
Pral5181g00018 407 Pfam Triose-phosphate Transporter family 104 397 IPR004853 -
Pral5181g00018 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 241 - -
Pral5181g00018 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 401 - -
Pral5181g00018 407 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 406 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5181g00018 Pral-Chr5181 103272 107451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5181g00018 72 405 Antiporters AT3G01550 62.018 4.99e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5181g00018 K15283 - gmx:100819280 527.324