Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5181g00017 ATGGGCCCCTCCCTGTCACCATTATACCATCAAGCTTATGGATCACCGTTCAAACCTAAGCTTCAGGACGAGCTCTTTTTGTTTTTCCCTGAGAATAATCGATGGCAGGACGAAGGTCGCTCTGATCACAGGGACGATGACAGGAACAAGAAGCTGCAGATGCGTAAAGGTGGTATTCTAAAGAATACCAATATCATCAAAGGCCAGTGGACACCAGAAGAGGACAGAATGTTGGTGCAATTGGTGGAGCGATTTGGGATGAAAAAATGGTCACAAGTTGCAAAGGCTTTGAATGGAAGGGTGGGAAAGCAGTGTAGGGAGAGGTGGCACAACCATCTGCGTCCGGACATTAGGAAGGAGGCATGGACGGAGGAAGAAGACATGATCCTGATCGAAGCCCACAGGGAAGTAGGAAACAAGTGGGCAGAAATCGCTCGCAGGCTTCCGGGAAGAACAGAGAACACCATCAAGAACCACTGGAACGCCACGAAGCGTCGCCAGAACGCCAAGAAACACAGAAACAAGGGATCCACATCGAGGCCTTCACTTCTTCAGGAATACATCAAGCAAGTCACTTCAGGCCAAGGAACCTCAAAGCAGCCGAAGATCAAACAAGAACAAGCCGACGAGGAGGAGGAGGAGTTCGTTTACTATAACAACAATCATCATATGAACAACGTTATAGTTCGCTACGAGAGCGCCTCGGACGATGACGACACCAGCTCTGGAGAATGGGAGGTGGAGATGTATGAGGCGGAGGAGGGAGACGCCGGCGGCGATGAGGATGATCAGGAAGAGGAAGAGAAGACGGCGTATGAGAACAGTAAGGATAATGCGGCGGAGATGAACGTGTTTGTGCGAGAGGAGGGCATGAAGAAAGAGATGGATCTGATGGAGATGATCTGTGGTCCCAGCAAGTACTAA 924 0.5 MGPSLSPLYHQAYGSPFKPKLQDELFLFFPENNRWQDEGRSDHRDDDRNKKLQMRKGGILKNTNIIKGQWTPEEDRMLVQLVERFGMKKWSQVAKALNGRVGKQCRERWHNHLRPDIRKEAWTEEEDMILIEAHREVGNKWAEIARRLPGRTENTIKNHWNATKRRQNAKKHRNKGSTSRPSLLQEYIKQVTSGQGTSKQPKIKQEQADEEEEEFVYYNNNHHMNNVIVRYESASDDDDTSSGEWEVEMYEAEEGDAGGDEDDQEEEEKTAYENSKDNAAEMNVFVREEGMKKEMDLMEMICGPSKY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5181g00017 307 FunFam Transcriptional activator Myb isoform A 66 119 - -
Pral5181g00017 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 117 IPR017930 -
Pral5181g00017 307 MobiDBLite consensus disorder prediction 161 211 - -
Pral5181g00017 307 SUPERFAMILY Homeodomain-like 64 160 IPR009057 -
Pral5181g00017 307 SMART sant 66 115 IPR001005 -
Pral5181g00017 307 SMART sant 118 166 IPR001005 -
Pral5181g00017 307 ProSiteProfiles Myb-like domain profile. 62 113 IPR001005 -
Pral5181g00017 307 PANTHER MYB PROTEIN-RELATED 67 193 - -
Pral5181g00017 307 MobiDBLite consensus disorder prediction 178 202 - -
Pral5181g00017 307 ProSiteProfiles Myb-like domain profile. 114 164 IPR001005 -
Pral5181g00017 307 Pfam Myb-like DNA-binding domain 70 127 - -
Pral5181g00017 307 MobiDBLite consensus disorder prediction 238 268 - -
Pral5181g00017 307 Gene3D - 121 180 - -
Pral5181g00017 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 118 168 IPR017930 -
Pral5181g00017 307 MobiDBLite consensus disorder prediction 233 280 - -
Pral5181g00017 307 CDD SANT 70 113 IPR001005 -
Pral5181g00017 307 Gene3D - 66 118 - -
Pral5181g00017 307 MobiDBLite consensus disorder prediction 163 177 - -
Pral5181g00017 307 CDD SANT 121 164 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5181g00017 Pral-Chr5181 97742 99500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5181g00017 61 194 MYB Transcription Factor Family AT4G18770 67.164 7.08e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5181g00017 Myb_DNA-bind_6 3.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5181g00017 K09422 - jre:108997042 234.958